(98 nodes) Zinc finger, PHD-type network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSEEEP00000035178	Uncharacterized protein. (333 aa)
	LOC113591883	Uncharacterized protein. (837 aa)
	LOC113582559	Uncharacterized protein. (1082 aa)
	phf20l1	PHD finger protein 20 like 1. (1073 aa)
	LOC113584727	PHD-type domain-containing protein. (726 aa)
	LOC113575190	Bromodomain PHD finger transcription factor. (2850 aa)
	phf6	PHD finger protein 6. (372 aa)
	LOC113571963	PHD finger protein 1. (357 aa)
	baz2a	Uncharacterized protein. (2485 aa)
	aire	Autoimmune regulator. (457 aa)
	LOC113573541	Uncharacterized protein. (1072 aa)
	Nsd1	Nuclear receptor binding SET domain protein 1b. (584 aa)
	phf19	PHD-type domain-containing protein. (566 aa)
	ing3	Inhibitor of growth protein. (419 aa)
	kdm5a	Lysine (K)-specific demethylase 5A. (1630 aa)
	brd1	Uncharacterized protein. (1173 aa)
	Nsd2	Uncharacterized protein. (603 aa)
	trim33	Uncharacterized protein. (1208 aa)
	LOC113577379	Bromodomain and PHD finger containing, 3b. (1166 aa)
	ints12	PHD-type domain-containing protein. (480 aa)
	baz1b	Bromodomain adjacent to zinc finger domain, 1B. (1577 aa)
	Phf12	PHD-type domain-containing protein. (131 aa)
	ing2	Inhibitor of growth protein. (280 aa)
	ENSEEEP00000017392	PHD-type domain-containing protein. (245 aa)
	LOC113587351	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1825 aa)
	ing4	Inhibitor of growth protein. (250 aa)
	ENSEEEP00000014635	PHD-type domain-containing protein. (261 aa)
	LOC113574796	Uncharacterized protein. (1895 aa)
	LOC113583350	Lysine (K)-specific demethylase 7Ab. (652 aa)
	LOC113572612	PHD-type domain-containing protein. (578 aa)
	uhrf1	Ubiquitin-like with PHD and ring finger domains 1. (784 aa)
	phf13	PHD finger protein 13. (303 aa)
	LOC113586630	PHD-type domain-containing protein. (1079 aa)
	LOC113572601	Uncharacterized protein. (1955 aa)
	BPTF	Bromodomain PHD finger transcription factor. (2556 aa)
	LOC113585486	PHD finger protein 3. (1566 aa)
	phf14	PHD finger protein 14. (899 aa)
	phrf1	PHD and ring finger domains 1. (1607 aa)
	LOC113581348	Inhibitor of growth protein. (312 aa)
	LOC113577525	Uncharacterized protein. (2299 aa)
	dpf1	D4, zinc and double PHD fingers family 1. (353 aa)
	LOC113576334	Uncharacterized protein. (847 aa)
	LOC113576372	Inhibitor of growth protein. (241 aa)
	LOC113576366	Uncharacterized protein. (1241 aa)
	kmt2e	Lysine (K)-specific methyltransferase 2E. (1447 aa)
	kdm7a	Uncharacterized protein. (698 aa)
	LOC113589369	Transcription factor 20. (2100 aa)
	baz1a	Bromodomain adjacent to zinc finger domain, 1A. (1441 aa)
	ENSEEEP00000007249	Nuclear receptor binding SET domain protein 1a. (783 aa)
	LOC113587659	Lysine (K)-specific demethylase 4C. (1415 aa)
	LOC113575831	Uncharacterized protein. (567 aa)
	LOC113571493	Lysine (K)-specific demethylase 2Aa. (1288 aa)
	g2e3	Uncharacterized protein. (704 aa)
	LOC113578751	Lysine (K)-specific demethylase 5C. (1418 aa)
	LOC113572091	Uncharacterized protein. (1528 aa)
	LOC113579833	Chromodomain helicase DNA binding protein 3. (1811 aa)
	LOC113590441	Uncharacterized protein. (1066 aa)
	kdm2b	Uncharacterized protein. (852 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1627 aa)
	jade3	Uncharacterized protein. (804 aa)
	ENSEEEP00000000679	Pygopus family PHD finger 1. (395 aa)
	brpf1	Bromodomain and PHD finger containing, 1. (1236 aa)
	LOC113573063	Bromodomain and PHD finger containing, 3a. (1211 aa)
	KAT6B	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (812 aa)
	ENSEEEP00000029683	Lysine (K)-specific demethylase 2Bb. (673 aa)
	LOC113573366	Uncharacterized protein. (405 aa)
	LOC113587825	Uncharacterized protein. (364 aa)
	ENSEEEP00000028733	Uncharacterized protein. (345 aa)
	ENSEEEP00000028294	PHD-type domain-containing protein. (628 aa)
	nsd3	Nuclear receptor binding SET domain protein 3. (1485 aa)
	ENSEEEP00000027656	D4, zinc and double PHD fingers, family 3. (201 aa)
	LOC113586799	Chromodomain helicase DNA binding protein 5. (1840 aa)
	LOC113586819	Uncharacterized protein. (572 aa)
	phf23	PHD domain-containing protein. (320 aa)
	LOC113591480	Lysine (K)-specific demethylase 4A, genome duplicate b. (917 aa)
	ING1	Inhibitor of growth protein. (291 aa)
	mtf2	Metal response element binding transcription factor 2. (587 aa)
	LOC113585674	Zinc finger, MYND-type containing 8. (1206 aa)
	LOC113586165	C2H2-type domain-containing protein. (972 aa)
	phf21a	PHD finger protein 21Ab. (735 aa)
	UHRF2	Ubiquitin like with PHD and ring finger domains 2. (824 aa)
	ENSEEEP00000020732	Uncharacterized protein. (526 aa)
	dpf2	Uncharacterized protein. (415 aa)
	LOC113578910	PHD finger protein 20, a. (896 aa)
	Kmt2d	Lysine (K)-specific methyltransferase 2D. (3373 aa)
	ENSEEEP00000019203	Uncharacterized protein. (388 aa)
	LOC113573297	Remodeling and spacing factor 1b, tandem duplicate 1. (1646 aa)
	ENSEEEP00000019120	PHD finger protein 21Aa. (769 aa)
	phf8	Uncharacterized protein. (1040 aa)
	kdm5b	Lysine (K)-specific demethylase 5Ba. (1479 aa)
	LOC113586923	Tripartite motif containing 66. (812 aa)
	phf10	PHD-type domain-containing protein. (495 aa)
	kdm2a	Lysine (K)-specific demethylase 2Ab. (1253 aa)
	phf2	PHD finger protein 2. (1072 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (774 aa)
	LOC113570273	PHD domain-containing protein. (305 aa)
	zmynd11	Zinc finger, MYND-type containing 11. (635 aa)
	fbxl19	Uncharacterized protein. (823 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BPTF	LOC113573297	ENSEEEP00000011067	ENSEEEP00000019152	Bromodomain PHD finger transcription factor.	Remodeling and spacing factor 1b, tandem duplicate 1.	0.695
BPTF	LOC113585486	ENSEEEP00000011067	ENSEEEP00000011054	Bromodomain PHD finger transcription factor.	PHD finger protein 3.	0.569
BPTF	taf3	ENSEEEP00000011067	ENSEEEP00000032259	Bromodomain PHD finger transcription factor.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.405
ENSEEEP00000007249	LOC113571493	ENSEEEP00000007249	ENSEEEP00000006658	Nuclear receptor binding SET domain protein 1a.	Lysine (K)-specific demethylase 2Aa.	0.415
ENSEEEP00000007249	kmt2e	ENSEEEP00000007249	ENSEEEP00000052207	Nuclear receptor binding SET domain protein 1a.	Lysine (K)-specific methyltransferase 2E.	0.404
ENSEEEP00000017392	Nsd2	ENSEEEP00000017392	ENSEEEP00000045888	PHD-type domain-containing protein.	Uncharacterized protein.	0.419
ENSEEEP00000019120	LOC113572601	ENSEEEP00000019120	ENSEEEP00000011588	PHD finger protein 21Aa.	Uncharacterized protein.	0.402
ENSEEEP00000019120	LOC113574796	ENSEEEP00000019120	ENSEEEP00000014466	PHD finger protein 21Aa.	Uncharacterized protein.	0.402
ENSEEEP00000019120	LOC113577525	ENSEEEP00000019120	ENSEEEP00000050141	PHD finger protein 21Aa.	Uncharacterized protein.	0.435
ENSEEEP00000019120	LOC113579833	ENSEEEP00000019120	ENSEEEP00000003888	PHD finger protein 21Aa.	Chromodomain helicase DNA binding protein 3.	0.405
ENSEEEP00000019120	LOC113586799	ENSEEEP00000019120	ENSEEEP00000027611	PHD finger protein 21Aa.	Chromodomain helicase DNA binding protein 5.	0.405
ENSEEEP00000019120	aire	ENSEEEP00000019120	ENSEEEP00000044037	PHD finger protein 21Aa.	Autoimmune regulator.	0.405
ENSEEEP00000019120	baz1a	ENSEEEP00000019120	ENSEEEP00000008382	PHD finger protein 21Aa.	Bromodomain adjacent to zinc finger domain, 1A.	0.569
ENSEEEP00000019120	baz1b	ENSEEEP00000019120	ENSEEEP00000048562	PHD finger protein 21Aa.	Bromodomain adjacent to zinc finger domain, 1B.	0.435
ENSEEEP00000019120	baz2a	ENSEEEP00000019120	ENSEEEP00000043702	PHD finger protein 21Aa.	Uncharacterized protein.	0.435
ENSEEEP00000019120	ing3	ENSEEEP00000019120	ENSEEEP00000044687	PHD finger protein 21Aa.	Inhibitor of growth protein.	0.435
ENSEEEP00000019203	kmt2e	ENSEEEP00000019203	ENSEEEP00000052207	Uncharacterized protein.	Lysine (K)-specific methyltransferase 2E.	0.416
ENSEEEP00000020732	Kmt2d	ENSEEEP00000020732	ENSEEEP00000019214	Uncharacterized protein.	Lysine (K)-specific methyltransferase 2D.	0.789
ENSEEEP00000020732	kmt2e	ENSEEEP00000020732	ENSEEEP00000052207	Uncharacterized protein.	Lysine (K)-specific methyltransferase 2E.	0.416
ING1	KAT6B	ENSEEEP00000024619	ENSEEEP00000000092	Inhibitor of growth protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.593