31 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113591480	Lysine (K)-specific demethylase 4A, genome duplicate b. (917 aa)
	LOC113583350	Lysine (K)-specific demethylase 7Ab. (652 aa)
	kdm6a	Lysine (K)-specific demethylase 6A. (1414 aa)
	ENSEEEP00000016925	JmjC domain-containing protein. (496 aa)
	kdm5b	Lysine (K)-specific demethylase 5Ba. (1479 aa)
	phf8	Uncharacterized protein. (1040 aa)
	jarid2	Jumonji, AT rich interactive domain 2b. (1308 aa)
	riox1	Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (542 aa)
	Kdm6b	Lysine (K)-specific demethylase 6B, a. (1532 aa)
	riox2	Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (477 aa)
	ENSEEEP00000029683	Lysine (K)-specific demethylase 2Bb. (673 aa)
	kdm3b	JmjC domain-containing protein. (1829 aa)
	kdm2a	Lysine (K)-specific demethylase 2Ab. (1253 aa)
	phf2	PHD finger protein 2. (1072 aa)
	LOC113584636	Jumonji domain containing 1Cb. (2583 aa)
	LOC113575644	Jumonji, AT rich interactive domain 2a. (1187 aa)
	jmjd4	JmjC domain-containing protein. (422 aa)
	hspbap1	JmjC domain-containing protein. (446 aa)
	JMJD8	JmjC domain-containing protein. (264 aa)
	kdm5a	Lysine (K)-specific demethylase 5A. (1630 aa)
	jmjd6	JmjC domain-containing protein. (403 aa)
	kdm7a	Uncharacterized protein. (698 aa)
	kdm8	JmjC domain-containing protein. (409 aa)
	hif1an	JmjC domain-containing protein. (348 aa)
	tyw5	tRNA-yW synthesizing protein 5. (318 aa)
	LOC113572091	Uncharacterized protein. (1528 aa)
	LOC113578751	Lysine (K)-specific demethylase 5C. (1418 aa)
	LOC113571493	Lysine (K)-specific demethylase 2Aa. (1288 aa)
	LOC113587659	Lysine (K)-specific demethylase 4C. (1415 aa)
	jmjd7	Jumonji domain containing 7. (286 aa)
	JMJD1C	JmjC domain-containing protein. (2196 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000016925	ENSEEEP00000029683	ENSEEEP00000016925	ENSEEEP00000029683	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Bb.	0.568
ENSEEEP00000016925	LOC113571493	ENSEEEP00000016925	ENSEEEP00000006658	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Aa.	0.568
ENSEEEP00000016925	LOC113583350	ENSEEEP00000016925	ENSEEEP00000013112	JmjC domain-containing protein.	Lysine (K)-specific demethylase 7Ab.	0.403
ENSEEEP00000016925	kdm2a	ENSEEEP00000016925	ENSEEEP00000031872	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Ab.	0.568
ENSEEEP00000016925	kdm7a	ENSEEEP00000016925	ENSEEEP00000052221	JmjC domain-containing protein.	Uncharacterized protein.	0.403
ENSEEEP00000016925	phf2	ENSEEEP00000016925	ENSEEEP00000031945	JmjC domain-containing protein.	PHD finger protein 2.	0.403
ENSEEEP00000016925	phf8	ENSEEEP00000016925	ENSEEEP00000018801	JmjC domain-containing protein.	Uncharacterized protein.	0.403
ENSEEEP00000029683	ENSEEEP00000016925	ENSEEEP00000029683	ENSEEEP00000016925	Lysine (K)-specific demethylase 2Bb.	JmjC domain-containing protein.	0.568
ENSEEEP00000029683	JMJD1C	ENSEEEP00000029683	ENSEEEP00000012446	Lysine (K)-specific demethylase 2Bb.	JmjC domain-containing protein.	0.420
ENSEEEP00000029683	Kdm6b	ENSEEEP00000029683	ENSEEEP00000023391	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 6B, a.	0.568
ENSEEEP00000029683	LOC113584636	ENSEEEP00000029683	ENSEEEP00000032249	Lysine (K)-specific demethylase 2Bb.	Jumonji domain containing 1Cb.	0.426
ENSEEEP00000029683	kdm3b	ENSEEEP00000029683	ENSEEEP00000031202	Lysine (K)-specific demethylase 2Bb.	JmjC domain-containing protein.	0.426
ENSEEEP00000029683	kdm6a	ENSEEEP00000029683	ENSEEEP00000014353	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 6A.	0.568
JMJD1C	ENSEEEP00000029683	ENSEEEP00000012446	ENSEEEP00000029683	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Bb.	0.420
JMJD1C	LOC113571493	ENSEEEP00000012446	ENSEEEP00000006658	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Aa.	0.420
JMJD1C	kdm2a	ENSEEEP00000012446	ENSEEEP00000031872	JmjC domain-containing protein.	Lysine (K)-specific demethylase 2Ab.	0.420
JMJD8	riox2	ENSEEEP00000040438	ENSEEEP00000025963	JmjC domain-containing protein.	Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.	0.577
JMJD8	tyw5	ENSEEEP00000040438	ENSEEEP00000003036	JmjC domain-containing protein.	tRNA-yW synthesizing protein 5.	0.578
Kdm6b	ENSEEEP00000029683	ENSEEEP00000023391	ENSEEEP00000029683	Lysine (K)-specific demethylase 6B, a.	Lysine (K)-specific demethylase 2Bb.	0.568
Kdm6b	LOC113571493	ENSEEEP00000023391	ENSEEEP00000006658	Lysine (K)-specific demethylase 6B, a.	Lysine (K)-specific demethylase 2Aa.	0.568