(46 nodes) K Homology domain network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sf1	CCHC-type domain-containing protein. (664 aa)
	LOC113591200	KH-type splicing regulatory protein. (397 aa)
	LOC113587687	Uncharacterized protein. (661 aa)
	MEX3C	Uncharacterized protein. (453 aa)
	LOC113568561	KH domain containing, RNA binding, signal transduction associated 1a. (330 aa)
	igf2bp3	Uncharacterized protein. (605 aa)
	khdrbs1	KH domain-containing protein. (355 aa)
	pno1	Partner of NOB1 homolog. (252 aa)
	LOC113585025	Insulin-like growth factor 2 mRNA binding protein 2b. (400 aa)
	LOC113578946	Uncharacterized protein. (351 aa)
	ENSEEEP00000020274	KH domain-containing protein. (283 aa)
	ENSEEEP00000020938	Poly(rC) binding protein 4. (369 aa)
	mex3a	RING-type domain-containing protein. (520 aa)
	LOC113587820	KH domain-containing protein. (379 aa)
	PNPT1	S1 motif domain-containing protein. (769 aa)
	hnrnpk	Heterogeneous nuclear ribonucleoprotein K. (419 aa)
	akap1	Tudor domain-containing protein. (870 aa)
	LOC113569379	KH domain-containing protein. (170 aa)
	LOC113572761	KH domain-containing protein. (329 aa)
	fubp1	KH-type splicing regulatory protein. (663 aa)
	LOC113577264	Uncharacterized protein. (335 aa)
	LOC113575576	Bicaudal C homolog 2. (798 aa)
	exosc3	KH_dom_type_1 domain-containing protein. (245 aa)
	LOC113586934	Uncharacterized protein. (432 aa)
	tdrkh	Tudor and KH domain containing. (531 aa)
	MEX3D	RING-type domain-containing protein. (513 aa)
	mex3b	Mex-3 RNA binding family member B. (504 aa)
	LOC113584182	High density lipoprotein binding protein b. (1257 aa)
	fmr1	Uncharacterized protein. (587 aa)
	fxr1	Uncharacterized protein. (675 aa)
	fubp3	Uncharacterized protein. (595 aa)
	LOC113590813	ANK_REP_REGION domain-containing protein. (2421 aa)
	LOC113580321	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (604 aa)
	LOC113574641	Poly(rC) binding protein 3. (347 aa)
	KHDRBS3	KH RNA binding domain containing, signal transduction associated 3. (346 aa)
	LOC113574629	Insulin-like growth factor 2 mRNA binding protein 2a. (602 aa)
	LOC113574709	Neuro-oncological ventral antigen 2. (483 aa)
	LOC113589724	Neuro-oncological ventral antigen 1. (464 aa)
	LOC113583703	Uncharacterized protein. (355 aa)
	rps3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (229 aa)
	igf2bp1	Insulin-like growth factor 2 mRNA binding protein 1. (572 aa)
	khdrbs2	KH domain containing, RNA binding, signal transduction associated 2. (328 aa)
	hdlbp	Uncharacterized protein. (1277 aa)
	ENSEEEP00000010258	Uncharacterized protein. (342 aa)
	exosc2	Uncharacterized protein. (295 aa)
	LOC113577668	KH domain-containing protein. (341 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000010258	LOC113586934	ENSEEEP00000010258	ENSEEEP00000031375	Uncharacterized protein.	Uncharacterized protein.	0.536
ENSEEEP00000010258	hnrnpk	ENSEEEP00000010258	ENSEEEP00000003640	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein K.	0.536
ENSEEEP00000020938	LOC113586934	ENSEEEP00000020938	ENSEEEP00000031375	Poly(rC) binding protein 4.	Uncharacterized protein.	0.536
ENSEEEP00000020938	hnrnpk	ENSEEEP00000020938	ENSEEEP00000003640	Poly(rC) binding protein 4.	Heterogeneous nuclear ribonucleoprotein K.	0.536
KHDRBS3	LOC113586934	ENSEEEP00000044421	ENSEEEP00000031375	KH RNA binding domain containing, signal transduction associated 3.	Uncharacterized protein.	0.457
KHDRBS3	fubp3	ENSEEEP00000044421	ENSEEEP00000036108	KH RNA binding domain containing, signal transduction associated 3.	Uncharacterized protein.	0.499
KHDRBS3	hnrnpk	ENSEEEP00000044421	ENSEEEP00000003640	KH RNA binding domain containing, signal transduction associated 3.	Heterogeneous nuclear ribonucleoprotein K.	0.457
LOC113568561	LOC113586934	ENSEEEP00000016776	ENSEEEP00000031375	KH domain containing, RNA binding, signal transduction associated 1a.	Uncharacterized protein.	0.457
LOC113568561	LOC113591200	ENSEEEP00000016776	ENSEEEP00000012846	KH domain containing, RNA binding, signal transduction associated 1a.	KH-type splicing regulatory protein.	0.437
LOC113568561	fubp3	ENSEEEP00000016776	ENSEEEP00000036108	KH domain containing, RNA binding, signal transduction associated 1a.	Uncharacterized protein.	0.432
LOC113568561	hnrnpk	ENSEEEP00000016776	ENSEEEP00000003640	KH domain containing, RNA binding, signal transduction associated 1a.	Heterogeneous nuclear ribonucleoprotein K.	0.457
LOC113572761	LOC113586934	ENSEEEP00000026213	ENSEEEP00000031375	KH domain-containing protein.	Uncharacterized protein.	0.503
LOC113572761	LOC113591200	ENSEEEP00000026213	ENSEEEP00000012846	KH domain-containing protein.	KH-type splicing regulatory protein.	0.425
LOC113572761	fubp1	ENSEEEP00000026213	ENSEEEP00000026667	KH domain-containing protein.	KH-type splicing regulatory protein.	0.425
LOC113572761	fubp3	ENSEEEP00000026213	ENSEEEP00000036108	KH domain-containing protein.	Uncharacterized protein.	0.507
LOC113572761	hnrnpk	ENSEEEP00000026213	ENSEEEP00000003640	KH domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.503
LOC113574641	LOC113586934	ENSEEEP00000043578	ENSEEEP00000031375	Poly(rC) binding protein 3.	Uncharacterized protein.	0.536
LOC113574641	hnrnpk	ENSEEEP00000043578	ENSEEEP00000003640	Poly(rC) binding protein 3.	Heterogeneous nuclear ribonucleoprotein K.	0.536
LOC113575576	LOC113590813	ENSEEEP00000030599	ENSEEEP00000039926	Bicaudal C homolog 2.	ANK_REP_REGION domain-containing protein.	0.435
LOC113577264	LOC113586934	ENSEEEP00000029932	ENSEEEP00000031375	Uncharacterized protein.	Uncharacterized protein.	0.536