24 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fbxl19	Uncharacterized protein. (823 aa)
	LOC113568886	NLRC4_HD2 domain-containing protein. (388 aa)
	Fbxl22	F-box and leucine-rich repeat protein 22. (245 aa)
	LOC113568715	NLRC4_HD2 domain-containing protein. (397 aa)
	fbxl5	F-box domain-containing protein. (725 aa)
	ENSEEEP00000006032	NACHT domain-containing protein. (874 aa)
	LOC113571493	Lysine (K)-specific demethylase 2Aa. (1288 aa)
	ENSEEEP00000009841	Uncharacterized protein. (769 aa)
	fbxl4	F-box and leucine-rich repeat protein 4. (605 aa)
	ENSEEEP00000014334	Uncharacterized protein. (393 aa)
	LOC113583363	Leucine rich repeat containing 29. (628 aa)
	fbxl15	F-box domain-containing protein. (306 aa)
	fbxl17	F-box domain-containing protein. (629 aa)
	ENSEEEP00000019728	NACHT domain-containing protein. (799 aa)
	LOC113587463	F-box domain-containing protein. (435 aa)
	FBXL14	F-box domain-containing protein. (400 aa)
	kdm2a	Lysine (K)-specific demethylase 2Ab. (1253 aa)
	skp2	F-box domain-containing protein. (410 aa)
	fbxl20	F-box domain-containing protein. (445 aa)
	amn1	Uncharacterized protein. (263 aa)
	LOC113581213	Si:ch73-173p19.1. (899 aa)
	fbxl16	Uncharacterized protein. (485 aa)
	LOC113572008	F-box and leucine-rich repeat protein 7. (446 aa)
	LOC113579745	F-box domain-containing protein. (400 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FBXL14	skp2	ENSEEEP00000029595	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.547
Fbxl22	fbxl15	ENSEEEP00000002493	ENSEEEP00000016038	F-box and leucine-rich repeat protein 22.	F-box domain-containing protein.	0.400
LOC113571493	skp2	ENSEEEP00000006658	ENSEEEP00000005980	Lysine (K)-specific demethylase 2Aa.	F-box domain-containing protein.	0.565
LOC113572008	skp2	ENSEEEP00000046085	ENSEEEP00000005980	F-box and leucine-rich repeat protein 7.	F-box domain-containing protein.	0.469
LOC113579745	skp2	ENSEEEP00000046708	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.547
LOC113587463	skp2	ENSEEEP00000028952	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.413
fbxl15	Fbxl22	ENSEEEP00000016038	ENSEEEP00000002493	F-box domain-containing protein.	F-box and leucine-rich repeat protein 22.	0.400
fbxl15	skp2	ENSEEEP00000016038	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.569
fbxl17	skp2	ENSEEEP00000019263	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.648
fbxl19	skp2	ENSEEEP00000034978	ENSEEEP00000005980	Uncharacterized protein.	F-box domain-containing protein.	0.565
fbxl20	skp2	ENSEEEP00000036363	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.413
fbxl4	skp2	ENSEEEP00000011432	ENSEEEP00000005980	F-box and leucine-rich repeat protein 4.	F-box domain-containing protein.	0.479
kdm2a	skp2	ENSEEEP00000031872	ENSEEEP00000005980	Lysine (K)-specific demethylase 2Ab.	F-box domain-containing protein.	0.565
skp2	FBXL14	ENSEEEP00000005980	ENSEEEP00000029595	F-box domain-containing protein.	F-box domain-containing protein.	0.547
skp2	LOC113571493	ENSEEEP00000005980	ENSEEEP00000006658	F-box domain-containing protein.	Lysine (K)-specific demethylase 2Aa.	0.565
skp2	LOC113572008	ENSEEEP00000005980	ENSEEEP00000046085	F-box domain-containing protein.	F-box and leucine-rich repeat protein 7.	0.469
skp2	LOC113579745	ENSEEEP00000005980	ENSEEEP00000046708	F-box domain-containing protein.	F-box domain-containing protein.	0.547
skp2	LOC113587463	ENSEEEP00000005980	ENSEEEP00000028952	F-box domain-containing protein.	F-box domain-containing protein.	0.413
skp2	fbxl15	ENSEEEP00000005980	ENSEEEP00000016038	F-box domain-containing protein.	F-box domain-containing protein.	0.569
skp2	fbxl17	ENSEEEP00000005980	ENSEEEP00000019263	F-box domain-containing protein.	F-box domain-containing protein.	0.648