(8 nodes) Synaptotagmin-like mitochondrial-lipid-binding domain network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pdzd8	Uncharacterized protein. (1179 aa)
	LOC113575335	Testis expressed 2. (1009 aa)
	LOC113574222	Extended synaptotagmin-like protein 1b. (1830 aa)
	TEX2	SMP-LTD domain-containing protein. (1065 aa)
	LOC113584114	Uncharacterized protein. (882 aa)
	LOC113588878	SMP-LTD domain-containing protein. (314 aa)
	LOC113577423	Extended synaptotagmin-like protein 3. (846 aa)
	LOC113581399	Extended synaptotagmin-like protein 1a. (891 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC113575335	pdzd8	ENSEEEP00000001464	ENSEEEP00000009784	Testis expressed 2.	Uncharacterized protein.	0.436
LOC113577423	LOC113581399	ENSEEEP00000047657	ENSEEEP00000051094	Extended synaptotagmin-like protein 3.	Extended synaptotagmin-like protein 1a.	0.477
LOC113577423	LOC113584114	ENSEEEP00000047657	ENSEEEP00000026579	Extended synaptotagmin-like protein 3.	Uncharacterized protein.	0.410
LOC113581399	LOC113577423	ENSEEEP00000051094	ENSEEEP00000047657	Extended synaptotagmin-like protein 1a.	Extended synaptotagmin-like protein 3.	0.477
LOC113581399	LOC113584114	ENSEEEP00000051094	ENSEEEP00000026579	Extended synaptotagmin-like protein 1a.	Uncharacterized protein.	0.402
LOC113584114	LOC113577423	ENSEEEP00000026579	ENSEEEP00000047657	Uncharacterized protein.	Extended synaptotagmin-like protein 3.	0.410
LOC113584114	LOC113581399	ENSEEEP00000026579	ENSEEEP00000051094	Uncharacterized protein.	Extended synaptotagmin-like protein 1a.	0.402
TEX2	pdzd8	ENSEEEP00000011100	ENSEEEP00000009784	SMP-LTD domain-containing protein.	Uncharacterized protein.	0.436
pdzd8	LOC113575335	ENSEEEP00000009784	ENSEEEP00000001464	Uncharacterized protein.	Testis expressed 2.	0.436
pdzd8	TEX2	ENSEEEP00000009784	ENSEEEP00000011100	Uncharacterized protein.	SMP-LTD domain-containing protein.	0.436