67 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113579745	F-box domain-containing protein. (400 aa)
	FBXO40	F-box protein 40. (635 aa)
	ENSEEEP00000000304	F-box domain-containing protein. (218 aa)
	fbxw4	Uncharacterized protein. (415 aa)
	fbxo30	Uncharacterized protein. (757 aa)
	Fbxl22	F-box and leucine-rich repeat protein 22. (245 aa)
	fbxo7	F-box domain-containing protein. (480 aa)
	LOC113570348	Si:ch73-290k24.5. (717 aa)
	skp2	F-box domain-containing protein. (410 aa)
	fbxl5	F-box domain-containing protein. (725 aa)
	LOC113570334	Uncharacterized protein. (854 aa)
	LOC113590515	Uncharacterized protein. (533 aa)
	LOC113573999	F-box protein 40, tandem duplicate 1. (671 aa)
	LOC113573991	F-box protein 40, tandem duplicate 2. (700 aa)
	fbxo34	F-box domain-containing protein. (737 aa)
	fbxo28	F-box domain-containing protein. (380 aa)
	fbxl4	F-box and leucine-rich repeat protein 4. (605 aa)
	fbxo25	Uncharacterized protein. (356 aa)
	fbxo16	F-box domain-containing protein. (363 aa)
	LOC113575466	Uncharacterized protein. (279 aa)
	LOC113572260	F-box domain-containing protein. (528 aa)
	ENSEEEP00000015465	F-box domain-containing protein. (82 aa)
	fbxw7	Uncharacterized protein. (548 aa)
	LOC113583363	Leucine rich repeat containing 29. (628 aa)
	fbxl15	F-box domain-containing protein. (306 aa)
	eloa	Uncharacterized protein. (623 aa)
	fbxw12	F-box domain-containing protein. (476 aa)
	fbxo10	F-box protein 10. (868 aa)
	fbxl17	F-box domain-containing protein. (629 aa)
	fbxo21	YccV-like domain-containing protein. (633 aa)
	fbxw8	Uncharacterized protein. (653 aa)
	fbxo15	F-box protein 15. (402 aa)
	fbxo41	F-box protein 41. (783 aa)
	LOC113579003	F-box domain-containing protein. (442 aa)
	fbxo33	F-box domain-containing protein. (484 aa)
	fbxo3	F-box protein 3. (457 aa)
	FBXL14	F-box domain-containing protein. (400 aa)
	LOC113575584	F-box and WD repeat domain containing 11a. (540 aa)
	LOC113591102	F-box domain-containing protein. (210 aa)
	fbxo45	Uncharacterized protein. (286 aa)
	fbxo32	F-box domain-containing protein. (355 aa)
	fbxo48	F-box domain-containing protein. (153 aa)
	fbxo22	F-box protein 22. (348 aa)
	LOC113572800	Uncharacterized protein. (880 aa)
	fbxo8	SEC7 domain-containing protein. (321 aa)
	fbxw9	WD_REPEATS_REGION domain-containing protein. (584 aa)
	fbh1	F-box domain-containing protein. (1043 aa)
	fbxo46	F-box domain-containing protein. (709 aa)
	tmem183a	Transmembrane protein 183A. (393 aa)
	fbxw2	Uncharacterized protein. (455 aa)
	fbxw5	Uncharacterized protein. (616 aa)
	fbxl16	Uncharacterized protein. (485 aa)
	FBXO39	F-box domain-containing protein. (477 aa)
	fbxo4	F-box protein 4. (371 aa)
	ENSEEEP00000043480	F-box domain-containing protein. (43 aa)
	LOC113584808	F-box protein 38. (394 aa)
	LOC113587639	Zgc:161973. (496 aa)
	ccnf	Cyclin F; Belongs to the cyclin family. (760 aa)
	fbxo9	F-box domain-containing protein. (424 aa)
	LOC113573590	F-box domain-containing protein. (374 aa)
	fbxo5	IBR domain-containing protein. (395 aa)
	LOC113572008	F-box and leucine-rich repeat protein 7. (446 aa)
	fbxo31	F-box domain-containing protein. (573 aa)
	FBXO11	F-box domain-containing protein. (677 aa)
	fbxo42	F-box protein 42. (735 aa)
	LOC113582595	F-box domain-containing protein. (445 aa)
	ect2l	Coiled-coil domain containing 28A. (816 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000015465	fbxo16	ENSEEEP00000015465	ENSEEEP00000012228	F-box domain-containing protein.	F-box domain-containing protein.	0.443
ENSEEEP00000015465	skp2	ENSEEEP00000015465	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.469
FBXL14	FBXO11	ENSEEEP00000029595	ENSEEEP00000046361	F-box domain-containing protein.	F-box domain-containing protein.	0.491
FBXL14	LOC113572800	ENSEEEP00000029595	ENSEEEP00000035638	F-box domain-containing protein.	Uncharacterized protein.	0.491
FBXL14	fbxo25	ENSEEEP00000029595	ENSEEEP00000012089	F-box domain-containing protein.	Uncharacterized protein.	0.481
FBXL14	fbxo33	ENSEEEP00000029595	ENSEEEP00000027420	F-box domain-containing protein.	F-box domain-containing protein.	0.420
FBXL14	fbxo45	ENSEEEP00000029595	ENSEEEP00000033519	F-box domain-containing protein.	Uncharacterized protein.	0.446
FBXL14	fbxo9	ENSEEEP00000029595	ENSEEEP00000045290	F-box domain-containing protein.	F-box domain-containing protein.	0.415
FBXL14	fbxw5	ENSEEEP00000029595	ENSEEEP00000042658	F-box domain-containing protein.	Uncharacterized protein.	0.462
FBXL14	skp2	ENSEEEP00000029595	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.547
FBXO11	FBXL14	ENSEEEP00000046361	ENSEEEP00000029595	F-box domain-containing protein.	F-box domain-containing protein.	0.491
FBXO11	LOC113579745	ENSEEEP00000046361	ENSEEEP00000046708	F-box domain-containing protein.	F-box domain-containing protein.	0.491
FBXO11	LOC113583363	ENSEEEP00000046361	ENSEEEP00000015812	F-box domain-containing protein.	Leucine rich repeat containing 29.	0.400
FBXO11	fbxo25	ENSEEEP00000046361	ENSEEEP00000012089	F-box domain-containing protein.	Uncharacterized protein.	0.447
FBXO11	fbxo32	ENSEEEP00000046361	ENSEEEP00000034246	F-box domain-containing protein.	F-box domain-containing protein.	0.447
FBXO11	fbxo4	ENSEEEP00000046361	ENSEEEP00000043427	F-box domain-containing protein.	F-box protein 4.	0.410
FBXO11	fbxo45	ENSEEEP00000046361	ENSEEEP00000033519	F-box domain-containing protein.	Uncharacterized protein.	0.545
FBXO11	fbxo9	ENSEEEP00000046361	ENSEEEP00000045290	F-box domain-containing protein.	F-box domain-containing protein.	0.537
FBXO11	fbxw5	ENSEEEP00000046361	ENSEEEP00000042658	F-box domain-containing protein.	Uncharacterized protein.	0.475
FBXO11	skp2	ENSEEEP00000046361	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.474