(29 nodes) CRAL-TRIO lipid binding domain superfamily network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113585585	Uncharacterized protein. (425 aa)
	LOC113587705	Uncharacterized protein. (751 aa)
	sestd1	SEC14 and spectrin domains 1. (705 aa)
	LOC113578841	Uncharacterized protein. (721 aa)
	bnip2	CRAL-TRIO domain-containing protein. (455 aa)
	LOC113585965	Ataxia, cerebellar, Cayman type b. (291 aa)
	LOC113581431	Kalirin RhoGEF kinase a. (2306 aa)
	ENSEEEP00000050711	MCF.2 cell line derived transforming sequence-like 2. (903 aa)
	ttpal	CRAL-TRIO domain-containing protein. (338 aa)
	LOC113577506	Mcf.2 cell line derived transforming sequence-like a. (921 aa)
	ENSEEEP00000047205	CRAL-TRIO domain-containing protein. (501 aa)
	trio	Uncharacterized protein. (3022 aa)
	LOC113585306	CRAL-TRIO domain-containing protein. (309 aa)
	plekhg4	Pleckstrin homology domain containing, family G (with RhoGef domain) member 4. (1733 aa)
	LOC113584350	SEC14-like lipid binding 7. (335 aa)
	ARHGAP8	Rho GTPase activating protein 8. (426 aa)
	ptpn9	Protein tyrosine phosphatase, non-receptor type 9, a. (314 aa)
	clvs2	CRAL-TRIO domain-containing protein. (329 aa)
	rlbp1	Retinaldehyde binding protein 1a. (311 aa)
	LOC113586945	Prune homolog 2 (Drosophila). (302 aa)
	mospd2	Uncharacterized protein. (581 aa)
	ENSEEEP00000026055	Mcf.2 cell line derived transforming sequence-like b. (773 aa)
	LOC113584523	Uncharacterized protein. (2778 aa)
	arhgap1	Uncharacterized protein. (434 aa)
	LOC113578449	Trio Rho guanine nucleotide exchange factor b. (2725 aa)
	LOC113584077	Uncharacterized protein. (1641 aa)
	LOC113577801	Ataxia, cerebellar, Cayman type a. (325 aa)
	gdap2	Macro domain-containing protein. (505 aa)
	ttpa	CRAL-TRIO domain-containing protein. (306 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP8	arhgap1	ENSEEEP00000044262	ENSEEEP00000024912	Rho GTPase activating protein 8.	Uncharacterized protein.	0.428
LOC113585965	arhgap1	ENSEEEP00000000354	ENSEEEP00000024912	Ataxia, cerebellar, Cayman type b.	Uncharacterized protein.	0.750
arhgap1	ARHGAP8	ENSEEEP00000024912	ENSEEEP00000044262	Uncharacterized protein.	Rho GTPase activating protein 8.	0.428
arhgap1	LOC113585965	ENSEEEP00000024912	ENSEEEP00000000354	Uncharacterized protein.	Ataxia, cerebellar, Cayman type b.	0.750
arhgap1	plekhg4	ENSEEEP00000024912	ENSEEEP00000045536	Uncharacterized protein.	Pleckstrin homology domain containing, family G (with RhoGef domain) member 4.	0.560
plekhg4	arhgap1	ENSEEEP00000045536	ENSEEEP00000024912	Pleckstrin homology domain containing, family G (with RhoGef domain) member 4.	Uncharacterized protein.	0.560