STRINGSTRING
rhno1 rhno1 rad1 rad1 rad50 rad50 rmi2 rmi2 rpa1 rpa1 exd2 exd2 rfc4 rfc4 rmi1 rmi1 LOC113569058 LOC113569058 tdrd3 tdrd3 ENSEEEP00000006834 ENSEEEP00000006834 ENSEEEP00000007003 ENSEEEP00000007003 DNA2 DNA2 cdca7 cdca7 rfc2 rfc2 nbn nbn top3a top3a LOC113583945 LOC113583945 cdca7l cdca7l recql4 recql4 ENSEEEP00000013350 ENSEEEP00000013350 topbp1 topbp1 atrip atrip rad51 rad51 ENSEEEP00000017959 ENSEEEP00000017959 ENSEEEP00000018543 ENSEEEP00000018543 exo1 exo1 rfc5 rfc5 rfc3 rfc3 ENSEEEP00000023290 ENSEEEP00000023290 rpa3 rpa3 mre11 mre11 LOC113577231 LOC113577231 slf1 slf1 rad9a rad9a ENSEEEP00000032310 ENSEEEP00000032310 atr atr rbbp8 rbbp8 blm blm rad17 rad17 ankrd11 ankrd11 LOC113578639 LOC113578639 hus1 hus1 rpa2 rpa2 rad52 rad52 LOC113576847 LOC113576847 ankrd12 ankrd12 LOC113577499 LOC113577499 ENSEEEP00000050839 ENSEEEP00000050839
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rhno1Uncharacterized protein. (308 aa)
rad1Uncharacterized protein. (279 aa)
rad50RAD50 homolog, double strand break repair protein. (1181 aa)
rmi2Uncharacterized protein. (147 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (624 aa)
exd2Exonuclease 3'-5' domain containing 2. (616 aa)
rfc4AAA domain-containing protein. (357 aa)
rmi1DUF1767 domain-containing protein. (587 aa)
LOC113569058AAA_23 domain-containing protein. (469 aa)
tdrd3Uncharacterized protein. (790 aa)
ENSEEEP00000006834Uncharacterized protein. (110 aa)
ENSEEEP00000007003AAA_23 domain-containing protein. (53 aa)
DNA2DNA replication helicase/nuclease 2. (1002 aa)
cdca7zf-4CXXC_R1 domain-containing protein. (406 aa)
rfc2AAA domain-containing protein. (369 aa)
nbnNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (816 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1009 aa)
LOC113583945Tyrosine-protein kinase. (1088 aa)
cdca7lCell division cycle associated 7b. (425 aa)
recql4RecQ helicase-like 4. (817 aa)
ENSEEEP00000013350Uncharacterized protein. (106 aa)
topbp1DNA topoisomerase II binding protein 1. (1479 aa)
atripATR interacting protein. (763 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
ENSEEEP00000017959ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (784 aa)
ENSEEEP00000018543Methionine sulfoxide reductase B1b. (259 aa)
exo1Exonuclease 1. (771 aa)
rfc5AAA domain-containing protein. (363 aa)
rfc3AAA domain-containing protein. (356 aa)
ENSEEEP00000023290RAD9 checkpoint clamp component B. (181 aa)
rpa3Uncharacterized protein. (122 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (667 aa)
LOC113577231RPA_C domain-containing protein. (232 aa)
slf1ANK_REP_REGION domain-containing protein. (905 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (386 aa)
ENSEEEP00000032310ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2627 aa)
rbbp8SAE2 domain-containing protein. (131 aa)
blmBLM RecQ like helicase. (1281 aa)
rad17Uncharacterized protein. (683 aa)
ankrd11ANK_REP_REGION domain-containing protein. (2837 aa)
LOC113578639Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (528 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (283 aa)
rpa2RPA_C domain-containing protein. (280 aa)
rad52RAD52 homolog, DNA repair protein. (287 aa)
LOC113576847RING-type domain-containing protein. (995 aa)
ankrd12ANK_REP_REGION domain-containing protein. (419 aa)
LOC113577499Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (549 aa)
ENSEEEP00000050839Metallophos domain-containing protein. (106 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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