STRINGSTRING
LOC113569548 LOC113569548 polr2l polr2l ddb1 ddb1 ercc6 ercc6 cops3 cops3 LOC113569258 LOC113569258 polr2j polr2j rps27a rps27a ENSEEEP00000012815 ENSEEEP00000012815 LOC113572193 LOC113572193 LOC113580594 LOC113580594 gtf2h4 gtf2h4 uvssa uvssa aqr aqr cops5 cops5 ppp1r42 ppp1r42 ENSEEEP00000020550 ENSEEEP00000020550 ercc3 ercc3 cops4 cops4 tceanc2 tceanc2 ercc8 ercc8 cul4a cul4a cops7a cops7a polr2h polr2h cdk7 cdk7 nrde2 nrde2 LOC113588922 LOC113588922 gtf2h5 gtf2h5 ENSEEEP00000028691 ENSEEEP00000028691 Tcea2 Tcea2 cul4b cul4b ENSEEEP00000031728 ENSEEEP00000031728 polr2i polr2i polr2f polr2f polr2b polr2b cops2 cops2 gps1 gps1 polr2c polr2c polr2a polr2a gtf2h2c gtf2h2c ZNF830 ZNF830 xpa xpa gtf2h1 gtf2h1 TCEANC TCEANC polr2d polr2d COPS6 COPS6 LOC113584157 LOC113584157 xab2 xab2 usp7 usp7 cops8 cops8 polr2k polr2k ccnh ccnh polr2g polr2g kxd1 kxd1 POLR2E POLR2E uba52 uba52 mnat1 mnat1 rbx1 rbx1 gtf2h3 gtf2h3 ppie ppie prpf19 prpf19 ercc2 ercc2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113569548TFIIS central domain-containing protein. (153 aa)
polr2lUncharacterized protein. (67 aa)
ddb1CPSF_A domain-containing protein. (1147 aa)
ercc6Excision repair cross-complementation group 6. (1398 aa)
cops3PCI domain-containing protein. (423 aa)
LOC113569258General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
polr2jRNA_pol_L_2 domain-containing protein. (117 aa)
rps27aUbiquitin-like domain-containing protein. (156 aa)
ENSEEEP00000012815annotation not available (105 aa)
LOC113572193Uncharacterized protein. (663 aa)
LOC113580594ISY1 splicing factor homolog. (278 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (473 aa)
uvssaUncharacterized protein. (736 aa)
aqrAquarius intron-binding spliceosomal factor. (1417 aa)
cops5MPN domain-containing protein. (336 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (322 aa)
ENSEEEP00000020550Transcription elongation factor A (SII), 1. (86 aa)
ercc3Uncharacterized protein. (823 aa)
cops4PCI domain-containing protein. (410 aa)
tceanc2Uncharacterized protein. (211 aa)
ercc8WD_REPEATS_REGION domain-containing protein. (400 aa)
cul4aCullin 4A; Belongs to the cullin family. (782 aa)
cops7aPCI domain-containing protein. (268 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
cdk7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (345 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1019 aa)
LOC113588922E1A binding protein p300 b. (1825 aa)
gtf2h5Uncharacterized protein. (71 aa)
ENSEEEP00000028691Uncharacterized protein. (61 aa)
Tcea2Transcription elongation factor A (SII), 2. (306 aa)
cul4bCULLIN_2 domain-containing protein; Belongs to the cullin family. (862 aa)
ENSEEEP00000031728Uncharacterized protein. (384 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr2fUncharacterized protein. (127 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
cops2PCI domain-containing protein. (453 aa)
gps1PCI domain-containing protein. (533 aa)
polr2cRPOLD domain-containing protein. (275 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
gtf2h2cGeneral transcription factor IIH subunit. (398 aa)
ZNF830Zinc finger protein 830. (334 aa)
xpaXeroderma pigmentosum, complementation group A. (519 aa)
gtf2h1Uncharacterized protein. (607 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (279 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
COPS6MPN domain-containing protein. (328 aa)
LOC113584157Ubiquitin-like domain-containing protein. (77 aa)
xab2XPA binding protein 2. (859 aa)
usp7Uncharacterized protein; Belongs to the peptidase C19 family. (1103 aa)
cops8PCI domain-containing protein. (191 aa)
polr2kUncharacterized protein. (58 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (321 aa)
polr2gS1 domain-containing protein. (172 aa)
kxd1KxDL domain-containing protein. (183 aa)
POLR2EUncharacterized protein. (210 aa)
uba52Ubiquitin-like domain-containing protein. (128 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (135 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (293 aa)
ppieUncharacterized protein. (361 aa)
prpf19Pre-mRNA processing factor 19. (499 aa)
ercc2Helicase ATP-binding domain-containing protein. (760 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.