STRINGSTRING
LOC113587655 LOC113587655 ywhae ywhae rad1 rad1 rhno1 rhno1 ENSEEEP00000050839 ENSEEEP00000050839 rnf168 rnf168 LOC113585421 LOC113585421 Rnf169 Rnf169 ENSEEEP00000049401 ENSEEEP00000049401 ankrd12 ankrd12 chek2 chek2 LOC113576847 LOC113576847 ENSEEEP00000047072 ENSEEEP00000047072 ENSEEEP00000045899 ENSEEEP00000045899 Nsd2 Nsd2 wee2 wee2 rpa2 rpa2 uimc1 uimc1 brcc3 brcc3 hus1 hus1 LOC113577352 LOC113577352 ankrd11 ankrd11 LOC113569449 LOC113569449 ENSEEEP00000039231 ENSEEEP00000039231 LOC113574589 LOC113574589 LOC113575643 LOC113575643 ENSEEEP00000036356 ENSEEEP00000036356 rad17 rad17 ENSEEEP00000035351 ENSEEEP00000035351 blm blm rbbp8 rbbp8 ENSEEEP00000034862 ENSEEEP00000034862 tp53 tp53 atr atr LOC113575130 LOC113575130 LOC113572424 LOC113572424 ENSEEEP00000032310 ENSEEEP00000032310 rad9a rad9a WEE1 WEE1 abraxas1 abraxas1 babam1 babam1 slf1 slf1 LOC113579037 LOC113579037 ENSEEEP00000029755 ENSEEEP00000029755 pias4 pias4 ENSEEEP00000028715 ENSEEEP00000028715 rnf8 rnf8 LOC113577231 LOC113577231 mre11 mre11 LOC113576955 LOC113576955 rpa3 rpa3 ENSEEEP00000023290 ENSEEEP00000023290 rfc3 rfc3 ube2v2 ube2v2 ywhaq ywhaq ccnb1 ccnb1 LOC113582289 LOC113582289 rfc5 rfc5 exo1 exo1 ENSEEEP00000018543 ENSEEEP00000018543 ENSEEEP00000017959 ENSEEEP00000017959 atrip atrip topbp1 topbp1 ube2n ube2n rad50 rad50 ENSEEEP00000013350 ENSEEEP00000013350 LOC113568370 LOC113568370 ENSEEEP00000012861 ENSEEEP00000012861 babam2 babam2 recql4 recql4 cdca7l cdca7l top3a top3a nbn nbn rfc2 rfc2 cdca7 cdca7 DNA2 DNA2 chek1 chek1 LOC113582105 LOC113582105 ENSEEEP00000007003 ENSEEEP00000007003 tdrd3 tdrd3 ENSEEEP00000005940 ENSEEEP00000005940 LOC113569058 LOC113569058 LOC113569037 LOC113569037 HIST1H2BF HIST1H2BF LOC113568938 LOC113568938 ENSEEEP00000005177 ENSEEEP00000005177 LOC113568893 LOC113568893 LOC113568892 LOC113568892 LOC113574213 LOC113574213 LOC113579860 LOC113579860 LOC113578772 LOC113578772 rmi1 rmi1 rfc4 rfc4 exd2 exd2 cdk1 cdk1 LOC113583786 LOC113583786 rpa1 rpa1 rmi2 rmi2 ENSEEEP00000000760 ENSEEEP00000000760 LOC113569455 LOC113569455 ENSEEEP00000000649 ENSEEEP00000000649 ENSEEEP00000000319 ENSEEEP00000000319 LOC113567650 LOC113567650 LOC113577545 LOC113577545 CDC25B CDC25B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC11358765514_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
ywhae14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (255 aa)
rad1Uncharacterized protein. (279 aa)
rhno1Uncharacterized protein. (308 aa)
ENSEEEP00000050839Metallophos domain-containing protein. (106 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (471 aa)
LOC11358542114_3_3 domain-containing protein; Belongs to the 14-3-3 family. (244 aa)
Rnf169RING-type domain-containing protein. (106 aa)
ENSEEEP00000049401Histone H2B; Belongs to the histone H2B family. (134 aa)
ankrd12ANK_REP_REGION domain-containing protein. (419 aa)
chek2Uncharacterized protein. (526 aa)
LOC113576847RING-type domain-containing protein. (995 aa)
ENSEEEP00000047072Uncharacterized protein. (332 aa)
ENSEEEP00000045899PWWP domain-containing protein. (460 aa)
Nsd2Uncharacterized protein. (603 aa)
wee2Wee1-like protein kinase. (542 aa)
rpa2RPA_C domain-containing protein. (280 aa)
uimc1RAP80_UIM domain-containing protein. (953 aa)
brcc3BRCA1/BRCA2-containing complex, subunit 3. (269 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (283 aa)
LOC113577352Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (366 aa)
ankrd11ANK_REP_REGION domain-containing protein. (2837 aa)
LOC113569449Histone H4. (103 aa)
ENSEEEP00000039231Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
LOC113574589HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4800 aa)
LOC11357564314_3_3 domain-containing protein; Belongs to the 14-3-3 family. (242 aa)
ENSEEEP00000036356Histone H2A; Belongs to the histone H2A family. (158 aa)
rad17Uncharacterized protein. (683 aa)
ENSEEEP00000035351Endo/exonuclease/phosphatase domain-containing protein. (429 aa)
blmBLM RecQ like helicase. (1281 aa)
rbbp8SAE2 domain-containing protein. (131 aa)
ENSEEEP00000034862Protein inhibitor of activated STAT, 4b. (419 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (370 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2627 aa)
LOC11357513014_3_3 domain-containing protein; Belongs to the 14-3-3 family. (246 aa)
LOC113572424Ubiquitin-conjugating enzyme E2 variant 1. (176 aa)
ENSEEEP00000032310ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (386 aa)
WEE1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)
abraxas1MPN domain-containing protein. (419 aa)
babam1Uncharacterized protein. (359 aa)
slf1ANK_REP_REGION domain-containing protein. (905 aa)
LOC113579037Histone H2B; Belongs to the histone H2B family. (139 aa)
ENSEEEP00000029755Histone H2A; Belongs to the histone H2A family. (140 aa)
pias4Protein inhibitor of activated STAT, 4a. (503 aa)
ENSEEEP00000028715Uncharacterized protein. (420 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (484 aa)
LOC113577231RPA_C domain-containing protein. (232 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (667 aa)
LOC113576955Histone H2A; Belongs to the histone H2A family. (140 aa)
rpa3Uncharacterized protein. (122 aa)
ENSEEEP00000023290RAD9 checkpoint clamp component B. (181 aa)
rfc3AAA domain-containing protein. (356 aa)
ube2v2UBIQUITIN_CONJUGAT_2 domain-containing protein. (158 aa)
ywhaq14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
ccnb1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (396 aa)
LOC113582289Protein kinase domain-containing protein. (667 aa)
rfc5AAA domain-containing protein. (363 aa)
exo1Exonuclease 1. (771 aa)
ENSEEEP00000018543Methionine sulfoxide reductase B1b. (259 aa)
ENSEEEP00000017959ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (784 aa)
atripATR interacting protein. (763 aa)
topbp1DNA topoisomerase II binding protein 1. (1479 aa)
ube2nUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
rad50RAD50 homolog, double strand break repair protein. (1181 aa)
ENSEEEP00000013350Uncharacterized protein. (106 aa)
LOC113568370Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (91 aa)
ENSEEEP00000012861Histone H2B; Belongs to the histone H2B family. (110 aa)
babam2Uncharacterized protein. (442 aa)
recql4RecQ helicase-like 4. (817 aa)
cdca7lCell division cycle associated 7b. (425 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1009 aa)
nbnNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (816 aa)
rfc2AAA domain-containing protein. (369 aa)
cdca7zf-4CXXC_R1 domain-containing protein. (406 aa)
DNA2DNA replication helicase/nuclease 2. (1002 aa)
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (470 aa)
LOC11358210514_3_3 domain-containing protein; Belongs to the 14-3-3 family. (265 aa)
ENSEEEP00000007003AAA_23 domain-containing protein. (53 aa)
tdrd3Uncharacterized protein. (790 aa)
ENSEEEP00000005940Histone H2B; Belongs to the histone H2B family. (131 aa)
LOC113569058AAA_23 domain-containing protein. (469 aa)
LOC113569037Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
HIST1H2BFHistone cluster 1 H2B family member f; Belongs to the histone H2B family. (110 aa)
LOC113568938Histone H2A; Belongs to the histone H2A family. (115 aa)
ENSEEEP00000005177Histone domain-containing protein; Belongs to the histone H2B family. (140 aa)
LOC113568893Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC113568892Histone H2B; Belongs to the histone H2B family. (64 aa)
LOC11357421314_3_3 domain-containing protein; Belongs to the 14-3-3 family. (244 aa)
LOC11357986014_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
LOC11357877214_3_3 domain-containing protein; Belongs to the 14-3-3 family. (249 aa)
rmi1DUF1767 domain-containing protein. (587 aa)
rfc4AAA domain-containing protein. (357 aa)
exd2Exonuclease 3'-5' domain containing 2. (616 aa)
cdk1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (302 aa)
LOC113583786Histone H2B; Belongs to the histone H2B family. (117 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (624 aa)
rmi2Uncharacterized protein. (147 aa)
ENSEEEP00000000760Histone H2B; Belongs to the histone H2B family. (115 aa)
LOC113569455Histone H2B; Belongs to the histone H2B family. (67 aa)
ENSEEEP00000000649Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (91 aa)
ENSEEEP00000000319Histone domain-containing protein; Belongs to the histone H2B family. (104 aa)
LOC113567650Uncharacterized protein. (1631 aa)
LOC113577545Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma; Belongs to the 14-3-3 family. (245 aa)
CDC25BCell division cycle 25B. (551 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (20%) [HD]