STRINGSTRING
ccnt2 ccnt2 LOC113576879 LOC113576879 ENSEEEP00000047510 ENSEEEP00000047510 polr2g polr2g ccnh ccnh polr2k polr2k LOC113588776 LOC113588776 LOC113577973 LOC113577973 ENSEEEP00000044190 ENSEEEP00000044190 LOC113588120 LOC113588120 nelfb nelfb ctdp1 ctdp1 Ccnt1 Ccnt1 ENSEEEP00000041335 ENSEEEP00000041335 polr2d polr2d ccnk ccnk LOC113577891 LOC113577891 wdr61 wdr61 eaf2 eaf2 TCEANC TCEANC gtf2h1 gtf2h1 nelfcd nelfcd gtf2h2c gtf2h2c cinp cinp polr2a polr2a ENSEEEP00000035206 ENSEEEP00000035206 supt4h1 supt4h1 supt16h supt16h paf1 paf1 LOC113569548 LOC113569548 polr2l polr2l slc39a13 slc39a13 LOC113569258 LOC113569258 ssrp1 ssrp1 ENSEEEP00000007858 ENSEEEP00000007858 polr2j polr2j supt6h supt6h LOC113577105 LOC113577105 nelfa nelfa ENSEEEP00000012815 ENSEEEP00000012815 LOC113590058 LOC113590058 ccnq ccnq LOC113572193 LOC113572193 leo1 leo1 gtf2f1 gtf2f1 eaf1 eaf1 NCBP1 NCBP1 gtf2h4 gtf2h4 eloa eloa nelfe nelfe cdc73 cdc73 ENSEEEP00000020550 ENSEEEP00000020550 ercc3 ercc3 tceanc2 tceanc2 cdk9 cdk9 ell ell polr2h polr2h ENSEEEP00000026865 ENSEEEP00000026865 ENSEEEP00000027104 ENSEEEP00000027104 cdk7 cdk7 gtf2f2 gtf2f2 gtf2h5 gtf2h5 ENSEEEP00000028691 ENSEEEP00000028691 LOC113580833 LOC113580833 Tcea2 Tcea2 ctr9 ctr9 ENSEEEP00000031728 ENSEEEP00000031728 polr2i polr2i LOC113570719 LOC113570719 polr2f polr2f polr2b polr2b polr2c polr2c Mllt1 Mllt1 ENSEEEP00000035061 ENSEEEP00000035061 ENSEEEP00000035062 ENSEEEP00000035062 Mllt3 Mllt3 ercc2 ercc2 supt5h supt5h LOC113581469 LOC113581469 eloc eloc IWS1 IWS1 ncbp2 ncbp2 gtf2h3 gtf2h3 mnat1 mnat1 POLR2E POLR2E rtf1 rtf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnt2Uncharacterized protein; Belongs to the cyclin family. (708 aa)
LOC113576879Ubiquitin-like domain-containing protein. (119 aa)
ENSEEEP00000047510Perforin 1.2. (462 aa)
polr2gS1 domain-containing protein. (172 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (321 aa)
polr2kUncharacterized protein. (58 aa)
LOC113588776Elongin A, like. (554 aa)
LOC113577973Uncharacterized protein. (744 aa)
ENSEEEP00000044190AF4/FMR2 family, member 4. (994 aa)
LOC113588120MLLT1, super elongation complex subunit b. (600 aa)
nelfbNegative elongation factor complex member B. (616 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (950 aa)
Ccnt1Cyclin T1. (534 aa)
ENSEEEP00000041335Cyclin T1; Belongs to the cyclin family. (183 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
ccnkUncharacterized protein; Belongs to the cyclin family. (535 aa)
LOC113577891TPR_REGION domain-containing protein. (409 aa)
wdr61WD_REPEATS_REGION domain-containing protein. (305 aa)
eaf2EAF domain-containing protein. (259 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (279 aa)
gtf2h1Uncharacterized protein. (607 aa)
nelfcdUncharacterized protein. (596 aa)
gtf2h2cGeneral transcription factor IIH subunit. (398 aa)
cinpUncharacterized protein. (224 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
ENSEEEP00000035206Uncharacterized protein. (194 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
supt16hUncharacterized protein. (1064 aa)
paf1Uncharacterized protein. (513 aa)
LOC113569548TFIIS central domain-containing protein. (153 aa)
polr2lUncharacterized protein. (67 aa)
slc39a13Uncharacterized protein. (393 aa)
LOC113569258General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (698 aa)
ENSEEEP00000007858Elongin C paralog a; Belongs to the SKP1 family. (100 aa)
polr2jRNA_pol_L_2 domain-containing protein. (117 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1731 aa)
LOC113577105General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
nelfaNegative elongation factor complex member A. (544 aa)
ENSEEEP00000012815annotation not available (105 aa)
LOC113590058Uncharacterized protein. (587 aa)
ccnqUncharacterized protein; Belongs to the cyclin family. (251 aa)
LOC113572193Uncharacterized protein. (663 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (667 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (535 aa)
eaf1EAF domain-containing protein. (259 aa)
NCBP1MIF4G domain-containing protein. (796 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (473 aa)
eloaUncharacterized protein. (623 aa)
nelfeRRM domain-containing protein. (330 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (401 aa)
ENSEEEP00000020550Transcription elongation factor A (SII), 1. (86 aa)
ercc3Uncharacterized protein. (823 aa)
tceanc2Uncharacterized protein. (211 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (375 aa)
ellElongation factor RNA polymerase II. (526 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSEEEP00000026865Uncharacterized protein. (141 aa)
ENSEEEP00000027104Uncharacterized protein. (138 aa)
cdk7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (345 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
gtf2h5Uncharacterized protein. (71 aa)
ENSEEEP00000028691Uncharacterized protein. (61 aa)
LOC113580833Ubiquitin-like domain-containing protein. (119 aa)
Tcea2Transcription elongation factor A (SII), 2. (306 aa)
ctr9TPR_REGION domain-containing protein. (1159 aa)
ENSEEEP00000031728Uncharacterized protein. (384 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC113570719FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (717 aa)
polr2fUncharacterized protein. (127 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
polr2cRPOLD domain-containing protein. (275 aa)
Mllt1Uncharacterized protein. (109 aa)
ENSEEEP00000035061Uncharacterized protein. (158 aa)
ENSEEEP00000035062Uncharacterized protein. (214 aa)
Mllt3MLLT3, super elongation complex subunit. (259 aa)
ercc2Helicase ATP-binding domain-containing protein. (760 aa)
supt5hTranscription elongation factor SPT5. (1082 aa)
LOC113581469Uncharacterized protein; Belongs to the cyclin family. (579 aa)
elocSkp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (636 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (165 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (293 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
POLR2EUncharacterized protein. (210 aa)
rtf1Plus3 domain-containing protein. (678 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (34%) [HD]