12 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113584345	CULLIN_2 domain-containing protein; Belongs to the cullin family. (777 aa)
	LOC113591897	CULLIN_2 domain-containing protein; Belongs to the cullin family. (560 aa)
	skp2	F-box domain-containing protein. (410 aa)
	bach2	Uncharacterized protein. (802 aa)
	rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	fbxl17	F-box domain-containing protein. (629 aa)
	LOC113581664	Uncharacterized protein. (699 aa)
	LOC113590637	Uncharacterized protein. (771 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (135 aa)
	skp1	Uncharacterized protein; Belongs to the SKP1 family. (163 aa)
	ENSEEEP00000042138	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a. (499 aa)
	ENSEEEP00000042136	BZIP domain-containing protein. (210 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000042136	LOC113584345	ENSEEEP00000042136	ENSEEEP00000002811	BZIP domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
ENSEEEP00000042136	LOC113591897	ENSEEEP00000042136	ENSEEEP00000035758	BZIP domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
ENSEEEP00000042136	fbxl17	ENSEEEP00000042136	ENSEEEP00000019263	BZIP domain-containing protein.	F-box domain-containing protein.	0.659
ENSEEEP00000042136	rbx1	ENSEEEP00000042136	ENSEEEP00000049513	BZIP domain-containing protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.506
ENSEEEP00000042136	rps27a	ENSEEEP00000042136	ENSEEEP00000009424	BZIP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.478
ENSEEEP00000042136	skp1	ENSEEEP00000042136	ENSEEEP00000047043	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.465
ENSEEEP00000042138	LOC113584345	ENSEEEP00000042138	ENSEEEP00000002811	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
ENSEEEP00000042138	LOC113591897	ENSEEEP00000042138	ENSEEEP00000035758	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
ENSEEEP00000042138	fbxl17	ENSEEEP00000042138	ENSEEEP00000019263	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	F-box domain-containing protein.	0.659
ENSEEEP00000042138	rbx1	ENSEEEP00000042138	ENSEEEP00000049513	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Ring-box 1, E3 ubiquitin protein ligase.	0.506
ENSEEEP00000042138	rps27a	ENSEEEP00000042138	ENSEEEP00000009424	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Ubiquitin-like domain-containing protein.	0.478
ENSEEEP00000042138	skp1	ENSEEEP00000042138	ENSEEEP00000047043	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Uncharacterized protein; Belongs to the SKP1 family.	0.465
LOC113581664	LOC113584345	ENSEEEP00000025050	ENSEEEP00000002811	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
LOC113581664	LOC113591897	ENSEEEP00000025050	ENSEEEP00000035758	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.457
LOC113581664	fbxl17	ENSEEEP00000025050	ENSEEEP00000019263	Uncharacterized protein.	F-box domain-containing protein.	0.720
LOC113581664	rbx1	ENSEEEP00000025050	ENSEEEP00000049513	Uncharacterized protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.506
LOC113581664	rps27a	ENSEEEP00000025050	ENSEEEP00000009424	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.478
LOC113581664	skp1	ENSEEEP00000025050	ENSEEEP00000047043	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.465
LOC113584345	ENSEEEP00000042136	ENSEEEP00000002811	ENSEEEP00000042136	CULLIN_2 domain-containing protein; Belongs to the cullin family.	BZIP domain-containing protein.	0.457
LOC113584345	ENSEEEP00000042138	ENSEEEP00000002811	ENSEEEP00000042138	CULLIN_2 domain-containing protein; Belongs to the cullin family.	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	0.457