65 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psmb2	Proteasome subunit beta. (199 aa)
	LOC113585437	Proteasome subunit alpha type. (246 aa)
	LOC113578388	PCI domain-containing protein. (385 aa)
	LOC113592042	Proteasome subunit beta. (236 aa)
	LOC113584345	CULLIN_2 domain-containing protein; Belongs to the cullin family. (777 aa)
	psma1	Proteasome subunit alpha type. (262 aa)
	LOC113588778	Proteasome 26S subunit, non-ATPase 11a. (449 aa)
	psmf1	Uncharacterized protein. (272 aa)
	LOC113591075	Proteasome subunit beta. (233 aa)
	LOC113583840	Proteasome subunit beta. (279 aa)
	LOC113583232	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (442 aa)
	LOC113569892	Nuclear factor, erythroid 2-like 1a. (689 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	NFE2L1	BZIP domain-containing protein. (801 aa)
	psmd4	VWFA domain-containing protein. (373 aa)
	ENSEEEP00000014377	Protein kinase domain-containing protein. (271 aa)
	psme1	Uncharacterized protein. (250 aa)
	psmd6	PCI domain-containing protein. (389 aa)
	psmb1	Proteasome subunit beta. (243 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (600 aa)
	LOC113571685	Proteasome subunit alpha type. (246 aa)
	LOC113571724	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	psmb7	Proteasome subunit beta. (277 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (545 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (483 aa)
	psmc6	AAA domain-containing protein; Belongs to the AAA ATPase family. (403 aa)
	psmc4	AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
	psme3	Uncharacterized protein. (256 aa)
	psma6	Proteasome subunit alpha type. (265 aa)
	psmc3	AAA domain-containing protein; Belongs to the AAA ATPase family. (427 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (255 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (992 aa)
	psmd14	MPN domain-containing protein. (330 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (327 aa)
	LOC113589639	PCI domain-containing protein. (432 aa)
	ENSEEEP00000034549	Proteasome endopeptidase complex. (216 aa)
	psmd10	ANK_REP_REGION domain-containing protein. (233 aa)
	LOC113591897	CULLIN_2 domain-containing protein; Belongs to the cullin family. (560 aa)
	psmd3	PCI domain-containing protein. (514 aa)
	LOC113567554	Proteasome 26S subunit, non-ATPase 13. (366 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	psmd12	PCI domain-containing protein. (479 aa)
	LOC113589194	Proteasome subunit beta. (270 aa)
	gsk3b	Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (419 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (280 aa)
	psme2	Uncharacterized protein. (241 aa)
	LOC113574585	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (205 aa)
	LOC113584157	Ubiquitin-like domain-containing protein. (77 aa)
	LOC113571385	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	ENSEEEP00000044552	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (252 aa)
	psmd2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (898 aa)
	ENSEEEP00000046537	BZIP domain-containing protein. (314 aa)
	skp1	Uncharacterized protein; Belongs to the SKP1 family. (163 aa)
	LOC113581270	Proteasome subunit beta. (281 aa)
	LOC113581261	Proteasome subunit beta. (238 aa)
	LOC113581273	Proteasome subunit beta. (218 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	psmc5	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (135 aa)
	psmd9	PDZ domain-containing protein. (213 aa)
	LOC113576384	Si:dkeyp-80c12.7. (184 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000014377	ENSEEEP00000044552	ENSEEEP00000014377	ENSEEEP00000044552	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.899
ENSEEEP00000014377	ENSEEEP00000046537	ENSEEEP00000014377	ENSEEEP00000046537	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.575
ENSEEEP00000014377	LOC113569892	ENSEEEP00000014377	ENSEEEP00000007580	Protein kinase domain-containing protein.	Nuclear factor, erythroid 2-like 1a.	0.533
ENSEEEP00000014377	LOC113574585	ENSEEEP00000014377	ENSEEEP00000043402	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.899
ENSEEEP00000014377	LOC113584157	ENSEEEP00000014377	ENSEEEP00000044230	Protein kinase domain-containing protein.	Ubiquitin-like domain-containing protein.	0.437
ENSEEEP00000014377	LOC113584345	ENSEEEP00000014377	ENSEEEP00000002811	Protein kinase domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.510
ENSEEEP00000014377	LOC113588778	ENSEEEP00000014377	ENSEEEP00000004581	Protein kinase domain-containing protein.	Proteasome 26S subunit, non-ATPase 11a.	0.400
ENSEEEP00000014377	LOC113589639	ENSEEEP00000014377	ENSEEEP00000031512	Protein kinase domain-containing protein.	PCI domain-containing protein.	0.400
ENSEEEP00000014377	LOC113591897	ENSEEEP00000014377	ENSEEEP00000035758	Protein kinase domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.510
ENSEEEP00000014377	NFE2L1	ENSEEEP00000014377	ENSEEEP00000011915	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.533
ENSEEEP00000014377	nfe2l2	ENSEEEP00000014377	ENSEEEP00000021374	Protein kinase domain-containing protein.	Nuclear factor, erythroid 2-like 2a.	0.575
ENSEEEP00000014377	psma1	ENSEEEP00000014377	ENSEEEP00000003246	Protein kinase domain-containing protein.	Proteasome subunit alpha type.	0.413
ENSEEEP00000014377	psma4	ENSEEEP00000014377	ENSEEEP00000037788	Protein kinase domain-containing protein.	Proteasome subunit alpha type.	0.413
ENSEEEP00000014377	psma5	ENSEEEP00000014377	ENSEEEP00000019858	Protein kinase domain-containing protein.	Proteasome subunit alpha type.	0.413
ENSEEEP00000014377	psmb2	ENSEEEP00000014377	ENSEEEP00000015168	Protein kinase domain-containing protein.	Proteasome subunit beta.	0.413
ENSEEEP00000014377	psmb3	ENSEEEP00000014377	ENSEEEP00000038548	Protein kinase domain-containing protein.	Proteasome subunit beta.	0.413
ENSEEEP00000014377	psmb7	ENSEEEP00000014377	ENSEEEP00000021255	Protein kinase domain-containing protein.	Proteasome subunit beta.	0.407
ENSEEEP00000014377	psmc2	ENSEEEP00000014377	ENSEEEP00000021813	Protein kinase domain-containing protein.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.424
ENSEEEP00000014377	psmc3	ENSEEEP00000014377	ENSEEEP00000028233	Protein kinase domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.441
ENSEEEP00000014377	psmc4	ENSEEEP00000014377	ENSEEEP00000023802	Protein kinase domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.423