(15 nodes) Type I phosphodiesterase / nucleotide pyrophosphatase network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113589333	Uncharacterized protein. (809 aa)
	LOC113568409	Uncharacterized protein. (419 aa)
	gns	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family. (541 aa)
	ARSB	Sulfatase domain-containing protein. (526 aa)
	enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase 1. (835 aa)
	galns	Sulfatase domain-containing protein. (526 aa)
	enpp6	Uncharacterized protein. (441 aa)
	pigo	Phosphatidylinositol glycan anchor biosynthesis, class O. (1074 aa)
	ENSEEEP00000032587	Phosphatidylinositol glycan anchor biosynthesis class G. (975 aa)
	sgsh	Sulfatase domain-containing protein. (514 aa)
	enpp2	Ectonucleotide pyrophosphatase/phosphodiesterase 2. (858 aa)
	enpp4	Uncharacterized protein. (461 aa)
	pign	Phosphatidylinositol glycan anchor biosynthesis, class N. (934 aa)
	enpp5	Uncharacterized protein. (470 aa)
	arsa	Sulfatase domain-containing protein. (506 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARSB	arsa	ENSEEEP00000001510	ENSEEEP00000014450	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.957
ARSB	gns	ENSEEEP00000001510	ENSEEEP00000001865	Sulfatase domain-containing protein.	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	0.423
ENSEEEP00000032587	pign	ENSEEEP00000032587	ENSEEEP00000020035	Phosphatidylinositol glycan anchor biosynthesis class G.	Phosphatidylinositol glycan anchor biosynthesis, class N.	0.655
ENSEEEP00000032587	pigo	ENSEEEP00000032587	ENSEEEP00000032827	Phosphatidylinositol glycan anchor biosynthesis class G.	Phosphatidylinositol glycan anchor biosynthesis, class O.	0.578
LOC113589333	enpp6	ENSEEEP00000004246	ENSEEEP00000033334	Uncharacterized protein.	Uncharacterized protein.	0.915
arsa	ARSB	ENSEEEP00000014450	ENSEEEP00000001510	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.957
arsa	galns	ENSEEEP00000014450	ENSEEEP00000041398	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.671
arsa	gns	ENSEEEP00000014450	ENSEEEP00000001865	Sulfatase domain-containing protein.	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	0.432
arsa	sgsh	ENSEEEP00000014450	ENSEEEP00000026360	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.526
enpp6	LOC113589333	ENSEEEP00000033334	ENSEEEP00000004246	Uncharacterized protein.	Uncharacterized protein.	0.915
galns	arsa	ENSEEEP00000041398	ENSEEEP00000014450	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.671
galns	gns	ENSEEEP00000041398	ENSEEEP00000001865	Sulfatase domain-containing protein.	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	0.419
gns	ARSB	ENSEEEP00000001865	ENSEEEP00000001510	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	Sulfatase domain-containing protein.	0.423
gns	arsa	ENSEEEP00000001865	ENSEEEP00000014450	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	Sulfatase domain-containing protein.	0.432
gns	galns	ENSEEEP00000001865	ENSEEEP00000041398	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	Sulfatase domain-containing protein.	0.419
pign	ENSEEEP00000032587	ENSEEEP00000020035	ENSEEEP00000032587	Phosphatidylinositol glycan anchor biosynthesis, class N.	Phosphatidylinositol glycan anchor biosynthesis class G.	0.655
pign	pigo	ENSEEEP00000020035	ENSEEEP00000032827	Phosphatidylinositol glycan anchor biosynthesis, class N.	Phosphatidylinositol glycan anchor biosynthesis, class O.	0.584
pigo	ENSEEEP00000032587	ENSEEEP00000032827	ENSEEEP00000032587	Phosphatidylinositol glycan anchor biosynthesis, class O.	Phosphatidylinositol glycan anchor biosynthesis class G.	0.578
pigo	pign	ENSEEEP00000032827	ENSEEEP00000020035	Phosphatidylinositol glycan anchor biosynthesis, class O.	Phosphatidylinositol glycan anchor biosynthesis, class N.	0.584
sgsh	arsa	ENSEEEP00000026360	ENSEEEP00000014450	Sulfatase domain-containing protein.	Sulfatase domain-containing protein.	0.526