STRINGSTRING
scn4b scn4b scn2b scn2b LOC113591277 LOC113591277 scn3b scn3b LOC113585997 LOC113585997 LOC113585987 LOC113585987 LOC113590487 LOC113590487 ENSEEEP00000014881 ENSEEEP00000014881
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
scn4bSodium channel, voltage-gated, type IV, beta a. (243 aa)
scn2bVoltage-gated sodium channel beta subunit 2. (218 aa)
LOC113591277Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1020 aa)
scn3bSodium channel, voltage-gated, type III, beta. (239 aa)
LOC113585997Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1053 aa)
LOC113585987Si:ch73-74h11.1; Cadherins are calcium-dependent cell adhesion proteins. (856 aa)
LOC113590487Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (508 aa)
ENSEEEP00000014881Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (313 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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