(19 nodes) Glycosphingolipid biosynthesis - globo and isoglobo series network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113573104	Beta-hexosaminidase. (536 aa)
	LOC113589355	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (364 aa)
	LOC113583857	Glyco_tran_10_N domain-containing protein. (373 aa)
	GBGT1	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group). (357 aa)
	ENSEEEP00000005679	Uncharacterized protein. (331 aa)
	ENSEEEP00000010552	Uncharacterized protein. (310 aa)
	FUT9	Fucosyltransferase 9. (351 aa)
	ENSEEEP00000011250	Uncharacterized protein. (344 aa)
	ENSEEEP00000011781	Glyco_tran_10_N domain-containing protein. (364 aa)
	st8sia1	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family. (335 aa)
	hexb	Beta-hexosaminidase. (571 aa)
	LOC113587304	Glyco_tran_10_N domain-containing protein. (369 aa)
	ENSEEEP00000027419	Fucosyltransferase 9a. (368 aa)
	LOC113587844	Glyco_tran_10_N domain-containing protein. (420 aa)
	st3gal2	ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (378 aa)
	ENSEEEP00000032079	Glyco_tran_10_N domain-containing protein. (339 aa)
	ENSEEEP00000036889	Uncharacterized protein. (311 aa)
	LOC113591994	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (340 aa)
	naga	Alpha-galactosidase. (438 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000005679	LOC113573104	ENSEEEP00000005679	ENSEEEP00000003197	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000005679	hexb	ENSEEEP00000005679	ENSEEEP00000014518	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000010552	LOC113573104	ENSEEEP00000010552	ENSEEEP00000003197	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000010552	hexb	ENSEEEP00000010552	ENSEEEP00000014518	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000011250	LOC113573104	ENSEEEP00000011250	ENSEEEP00000003197	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000011250	hexb	ENSEEEP00000011250	ENSEEEP00000014518	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000036889	LOC113573104	ENSEEEP00000036889	ENSEEEP00000003197	Uncharacterized protein.	Beta-hexosaminidase.	0.900
ENSEEEP00000036889	hexb	ENSEEEP00000036889	ENSEEEP00000014518	Uncharacterized protein.	Beta-hexosaminidase.	0.900
GBGT1	LOC113573104	ENSEEEP00000005676	ENSEEEP00000003197	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group).	Beta-hexosaminidase.	0.900
GBGT1	hexb	ENSEEEP00000005676	ENSEEEP00000014518	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group).	Beta-hexosaminidase.	0.900
LOC113573104	ENSEEEP00000005679	ENSEEEP00000003197	ENSEEEP00000005679	Beta-hexosaminidase.	Uncharacterized protein.	0.900
LOC113573104	ENSEEEP00000010552	ENSEEEP00000003197	ENSEEEP00000010552	Beta-hexosaminidase.	Uncharacterized protein.	0.900
LOC113573104	ENSEEEP00000011250	ENSEEEP00000003197	ENSEEEP00000011250	Beta-hexosaminidase.	Uncharacterized protein.	0.900
LOC113573104	ENSEEEP00000036889	ENSEEEP00000003197	ENSEEEP00000036889	Beta-hexosaminidase.	Uncharacterized protein.	0.900
LOC113573104	GBGT1	ENSEEEP00000003197	ENSEEEP00000005676	Beta-hexosaminidase.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group).	0.900
LOC113573104	hexb	ENSEEEP00000003197	ENSEEEP00000014518	Beta-hexosaminidase.	Beta-hexosaminidase.	0.902
LOC113573104	naga	ENSEEEP00000003197	ENSEEEP00000051335	Beta-hexosaminidase.	Alpha-galactosidase.	0.948
LOC113573104	st8sia1	ENSEEEP00000003197	ENSEEEP00000014515	Beta-hexosaminidase.	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.913
LOC113589355	LOC113591994	ENSEEEP00000004464	ENSEEEP00000044852	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.904
LOC113589355	st3gal2	ENSEEEP00000004464	ENSEEEP00000030643	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.	0.902