5 items (Esox lucius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105012757	Si:ch211-57n23.4. (730 aa)
	appl1	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (711 aa)
	LOC105031064	Uncharacterized protein. (730 aa)
	appl2	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (665 aa)
	ENSELUP00000037496	Immunoglobulin superfamily, DCC subclass, member 3. (711 aa)

Your Current Organism:

Esox lucius

NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSELUP00000037496	appl1	ENSELUP00000037496	ENSELUP00000020945	Immunoglobulin superfamily, DCC subclass, member 3.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.929
ENSELUP00000037496	appl2	ENSELUP00000037496	ENSELUP00000031547	Immunoglobulin superfamily, DCC subclass, member 3.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.929
LOC105012757	appl1	ENSELUP00000013603	ENSELUP00000020945	Si:ch211-57n23.4.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.929
LOC105012757	appl2	ENSELUP00000013603	ENSELUP00000031547	Si:ch211-57n23.4.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.929
LOC105031064	appl1	ENSELUP00000031092	ENSELUP00000020945	Uncharacterized protein.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.929
LOC105031064	appl2	ENSELUP00000031092	ENSELUP00000031547	Uncharacterized protein.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.929
appl1	ENSELUP00000037496	ENSELUP00000020945	ENSELUP00000037496	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Immunoglobulin superfamily, DCC subclass, member 3.	0.929
appl1	LOC105012757	ENSELUP00000020945	ENSELUP00000013603	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Si:ch211-57n23.4.	0.929
appl1	LOC105031064	ENSELUP00000020945	ENSELUP00000031092	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Uncharacterized protein.	0.929
appl1	appl2	ENSELUP00000020945	ENSELUP00000031547	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.989
appl2	ENSELUP00000037496	ENSELUP00000031547	ENSELUP00000037496	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	Immunoglobulin superfamily, DCC subclass, member 3.	0.929
appl2	LOC105012757	ENSELUP00000031547	ENSELUP00000013603	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	Si:ch211-57n23.4.	0.929
appl2	LOC105031064	ENSELUP00000031547	ENSELUP00000031092	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	Uncharacterized protein.	0.929
appl2	appl1	ENSELUP00000031547	ENSELUP00000020945	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.989