(17 nodes) Mixed, incl. COMM domain, and Interferon-related developmental regulator network (Esox lucius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	commd7	COMM domain containing 7. (204 aa)
	LOC105008267	COMM domain containing 4. (199 aa)
	LOC105024395	Ankyrin repeat and SOCS box-containing 12b. (322 aa)
	vps35l	VPS35 endosomal protein sorting factor like. (966 aa)
	ccdc22	Coiled-coil domain containing 22. (629 aa)
	commd3	COMM domain-containing protein 3. (196 aa)
	commd2	COMM domain containing 2. (199 aa)
	commd1	Copper metabolism (Murr1) domain containing 1. (188 aa)
	vps26c	VPS26 endosomal protein sorting factor C. (307 aa)
	LOC105027376	COMM domain containing 5. (216 aa)
	commd8	COMM domain-containing protein. (176 aa)
	commd10	COMM domain-containing protein 10. (198 aa)
	LOC105017663	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (658 aa)
	ccdc93	Coiled-coil domain containing 93. (641 aa)
	asb8	Ankyrin repeat and SOCS box containing 8. (289 aa)
	ifrd1	Interferon-related developmental regulator 1. (465 aa)
	commd9	COMM domain-containing protein 9. (197 aa)

Your Current Organism:

Esox lucius

NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105008267	LOC105017663	ENSELUP00000002062	ENSELUP00000029658	COMM domain containing 4.	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.	0.538
LOC105008267	LOC105024395	ENSELUP00000002062	ENSELUP00000003680	COMM domain containing 4.	Ankyrin repeat and SOCS box-containing 12b.	0.650
LOC105008267	LOC105027376	ENSELUP00000002062	ENSELUP00000013494	COMM domain containing 4.	COMM domain containing 5.	0.939
LOC105008267	asb8	ENSELUP00000002062	ENSELUP00000032960	COMM domain containing 4.	Ankyrin repeat and SOCS box containing 8.	0.650
LOC105008267	ccdc22	ENSELUP00000002062	ENSELUP00000005728	COMM domain containing 4.	Coiled-coil domain containing 22.	0.952
LOC105008267	ccdc93	ENSELUP00000002062	ENSELUP00000029979	COMM domain containing 4.	Coiled-coil domain containing 93.	0.810
LOC105008267	commd1	ENSELUP00000002062	ENSELUP00000012288	COMM domain containing 4.	Copper metabolism (Murr1) domain containing 1.	0.933
LOC105008267	commd10	ENSELUP00000002062	ENSELUP00000019656	COMM domain containing 4.	COMM domain-containing protein 10.	0.917
LOC105008267	commd2	ENSELUP00000002062	ENSELUP00000010791	COMM domain containing 4.	COMM domain containing 2.	0.963
LOC105008267	commd3	ENSELUP00000002062	ENSELUP00000010476	COMM domain containing 4.	COMM domain-containing protein 3.	0.887
LOC105008267	commd7	ENSELUP00000002062	ENSELUP00000001439	COMM domain containing 4.	COMM domain containing 7.	0.888
LOC105008267	commd8	ENSELUP00000002062	ENSELUP00000014340	COMM domain containing 4.	COMM domain-containing protein.	0.919
LOC105008267	commd9	ENSELUP00000002062	ENSELUP00000041792	COMM domain containing 4.	COMM domain-containing protein 9.	0.938
LOC105008267	ifrd1	ENSELUP00000002062	ENSELUP00000035051	COMM domain containing 4.	Interferon-related developmental regulator 1.	0.555
LOC105008267	vps26c	ENSELUP00000002062	ENSELUP00000013460	COMM domain containing 4.	VPS26 endosomal protein sorting factor C.	0.829
LOC105008267	vps35l	ENSELUP00000002062	ENSELUP00000004524	COMM domain containing 4.	VPS35 endosomal protein sorting factor like.	0.779
LOC105017663	LOC105008267	ENSELUP00000029658	ENSELUP00000002062	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.	COMM domain containing 4.	0.538
LOC105017663	LOC105024395	ENSELUP00000029658	ENSELUP00000003680	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.	Ankyrin repeat and SOCS box-containing 12b.	0.545
LOC105017663	LOC105027376	ENSELUP00000029658	ENSELUP00000013494	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.	COMM domain containing 5.	0.512
LOC105017663	asb8	ENSELUP00000029658	ENSELUP00000032960	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.	Ankyrin repeat and SOCS box containing 8.	0.483