STRINGSTRING
exo1 exo1 zranb3 zranb3 LOC105024976 LOC105024976 dffb dffb tatdn1 tatdn1 EXOG EXOG DNA2 DNA2 ercc4 ercc4 apex1 apex1 ENSELUP00000026612 ENSELUP00000026612 LOC105017441 LOC105017441 ankle1 ankle1 bivm bivm mus81 mus81 dnase2 dnase2 DNASE1L3 DNASE1L3 endog endog LOC105013490 LOC105013490 gen1 gen1 fen1 fen1 DNASE1L1 DNASE1L1 dicer1 dicer1 fan1 fan1 ENSELUP00000007493 ENSELUP00000007493 ENSELUP00000007524 ENSELUP00000007524 ENSELUP00000007556 ENSELUP00000007556 ENDOV ENDOV LOC105020774 LOC105020774 mre11 mre11 LOC105027758 LOC105027758 APLF APLF rad51c rad51c dnase1 dnase1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exo1Exonuclease 1. (801 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1168 aa)
LOC105024976Zgc:110269. (350 aa)
dffbCIDE-N domain-containing protein. (335 aa)
tatdn1TatD DNase domain containing 1. (323 aa)
EXOGExo/endonuclease G. (362 aa)
DNA2DNA replication helicase/nuclease 2. (1421 aa)
ercc4Excision repair cross-complementation group 4. (892 aa)
apex1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (312 aa)
ENSELUP00000026612Excision repair cross-complementation group 5. (1138 aa)
LOC105017441SET domain and mariner transposase fusion gene. (299 aa)
ankle1Zgc:85936. (1233 aa)
bivmBasic, immunoglobulin-like variable motif containing. (600 aa)
mus81MUS81 structure-specific endonuclease subunit. (617 aa)
dnase2Deoxyribonuclease II, lysosomal. (405 aa)
DNASE1L3Deoxyribonuclease 1 like 3. (331 aa)
endogEndonuclease. (310 aa)
LOC105013490Deoxyribonuclease; Belongs to the DNase I family. (296 aa)
gen1Uncharacterized protein. (1014 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
DNASE1L1Deoxyribonuclease; Belongs to the DNase I family. (270 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1865 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1105 aa)
ENSELUP00000007493Uncharacterized protein. (285 aa)
ENSELUP00000007524Uncharacterized protein. (298 aa)
ENSELUP00000007556Uncharacterized protein. (235 aa)
ENDOVEndonuclease V. (296 aa)
LOC105020774Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (266 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (702 aa)
LOC105027758Deoxyribonuclease; Belongs to the DNase I family. (309 aa)
APLFAprataxin and PNKP like factor. (513 aa)
rad51cRAD51 paralog C. (359 aa)
dnase1Deoxyribonuclease; Belongs to the DNase I family. (286 aa)
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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