76 items (Esox lucius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105030962	Netrin 2. (638 aa)
	ENSELUP00000000536	Usher syndrome 2A (autosomal recessive, mild). (5044 aa)
	pxdn	Peroxidasin. (1466 aa)
	LOC105011397	Fras1 related extracellular matrix 1b. (2095 aa)
	ENSELUP00000001668	Netrin 4. (558 aa)
	ENSELUP00000002064	LAM_G_DOMAIN domain-containing protein. (910 aa)
	lamc3	Laminin, gamma 3. (1642 aa)
	hspg2	Heparan sulfate proteoglycan 2. (3201 aa)
	agrn	Agrin. (2107 aa)
	ENSELUP00000003801	Uncharacterized protein. (171 aa)
	LOC105010558	SPARC-like 2. (214 aa)
	LOC105030506	Vav 3 guanine nucleotide exchange factor b. (494 aa)
	ntn1	Netrin 1a. (603 aa)
	ENSELUP00000005940	Uncharacterized protein. (162 aa)
	ENSELUP00000005966	Uncharacterized protein. (163 aa)
	ENSELUP00000006238	Uncharacterized protein. (2983 aa)
	ENSELUP00000006416	Uncharacterized protein. (465 aa)
	NTN4	Netrin 4. (733 aa)
	ENSELUP00000008370	Uncharacterized protein. (3070 aa)
	LOC105013164	Netrin 1b. (600 aa)
	ENSELUP00000009469	Collagen type XVIII alpha 1 chain a. (980 aa)
	lamc2	Laminin, gamma 2. (1134 aa)
	ENSELUP00000009981	Laminin, beta 2 (laminin S). (1469 aa)
	ENSELUP00000010087	SPARC related modular calcium binding 2. (378 aa)
	ENSELUP00000012484	Fibronectin 1a. (2104 aa)
	LOC105007961	Laminin, beta 1b. (1821 aa)
	vwa1	Uncharacterized protein. (505 aa)
	Frem3	Fras1 related extracellular matrix 3. (3099 aa)
	ntng2	Netrin g2a. (553 aa)
	egfl6	EGF-like-domain, multiple 6. (538 aa)
	frem1	Fras1 related extracellular matrix 1a. (2195 aa)
	npnt	Nephronectin a. (520 aa)
	ENSELUP00000018143	Si:cabz01100188.1. (826 aa)
	LAMA3	Laminin subunit alpha 3. (2434 aa)
	ENSELUP00000018320	Laminin, alpha 5. (3613 aa)
	dag1	Dystroglycan 1. (890 aa)
	mmrn2	Multimerin 2a. (1095 aa)
	ccdc80	Coiled-coil domain containing 80. (844 aa)
	lama1	Laminin, alpha 1. (2953 aa)
	nid1	Nidogen 1a. (1140 aa)
	LOC105031491	Netrin 5. (858 aa)
	LAMA2	Laminin subunit alpha 2. (3146 aa)
	vwc2	Von Willebrand factor C domain containing 2. (305 aa)
	LOC105022468	Collagen, type XXVIII, alpha 2a. (1084 aa)
	sparc	Secreted protein, acidic, cysteine-rich (osteonectin). (320 aa)
	NTNG2	Netrin G2. (555 aa)
	LOC105020031	Collagen, type XXVIII, alpha 2b. (1073 aa)
	LOC105023750	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family. (872 aa)
	CASK	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (952 aa)
	col28a1	Uncharacterized protein. (1193 aa)
	LOC105019481	Endostatin domain-containing protein. (1045 aa)
	LOC105030111	Peptidase S72 domain-containing protein. (892 aa)
	ENSELUP00000026172	Peptidase S72 domain-containing protein. (759 aa)
	ntng1	Netrin g1a. (566 aa)
	LOC105023180	Coiled-coil domain containing 80 like 1. (904 aa)
	LOC105014395	Tenascin C. (1756 aa)
	LOC105017322	Si:dkey-202e22.2. (608 aa)
	LOC105010880	FRAS1 related extracellular matrix 2b. (3135 aa)
	ENSELUP00000029861	Uncharacterized protein. (143 aa)
	lamb3	Uncharacterized protein. (1158 aa)
	lamc1	Laminin, gamma 1. (1594 aa)
	LOC105027771	Laminin, beta 2-like. (1840 aa)
	ENSELUP00000034786	Fraser extracellular matrix complex subunit 1. (3921 aa)
	TIMP3	TIMP metallopeptidase inhibitor 3. (214 aa)
	LOC105021885	Collagen, type XXVIII, alpha 1b. (911 aa)
	ENSELUP00000035981	Nidogen 1b. (1241 aa)
	ENSELUP00000036033	Uncharacterized protein. (637 aa)
	LOC105013710	Von Willebrand factor A domain containing 1. (518 aa)
	ENSELUP00000036665	Nidogen 2a (osteonidogen). (1252 aa)
	LAMB1	Laminin, beta 1a. (1661 aa)
	lama4	Laminin, alpha 4. (1843 aa)
	LOC105006809	Uncharacterized protein. (577 aa)
	EGFLAM	EGF like, fibronectin type III and laminin G domains. (1088 aa)
	loxl4	Lysyl oxidase-like 4. (753 aa)
	smoc1	SPARC related modular calcium binding 1. (499 aa)
	itgb4	Integrin beta. (1854 aa)

Your Current Organism:

Esox lucius

NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASK	ENSELUP00000005940	ENSELUP00000024285	ENSELUP00000005940	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Uncharacterized protein.	0.472
CASK	ENSELUP00000005966	ENSELUP00000024285	ENSELUP00000005966	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Uncharacterized protein.	0.472
CASK	ENSELUP00000029861	ENSELUP00000024285	ENSELUP00000029861	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Uncharacterized protein.	0.472
CASK	ENSELUP00000035981	ENSELUP00000024285	ENSELUP00000035981	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Nidogen 1b.	0.472
CASK	ENSELUP00000036665	ENSELUP00000024285	ENSELUP00000036665	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Nidogen 2a (osteonidogen).	0.472
CASK	LOC105023750	ENSELUP00000024285	ENSELUP00000024163	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.769
CASK	nid1	ENSELUP00000024285	ENSELUP00000019525	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Nidogen 1a.	0.472
EGFLAM	ENSELUP00000000536	ENSELUP00000040252	ENSELUP00000000536	EGF like, fibronectin type III and laminin G domains.	Usher syndrome 2A (autosomal recessive, mild).	0.616
EGFLAM	ENSELUP00000026172	ENSELUP00000040252	ENSELUP00000026172	EGF like, fibronectin type III and laminin G domains.	Peptidase S72 domain-containing protein.	0.668
EGFLAM	LOC105030111	ENSELUP00000040252	ENSELUP00000026110	EGF like, fibronectin type III and laminin G domains.	Peptidase S72 domain-containing protein.	0.668
EGFLAM	dag1	ENSELUP00000040252	ENSELUP00000018619	EGF like, fibronectin type III and laminin G domains.	Dystroglycan 1.	0.668
ENSELUP00000000536	EGFLAM	ENSELUP00000000536	ENSELUP00000040252	Usher syndrome 2A (autosomal recessive, mild).	EGF like, fibronectin type III and laminin G domains.	0.616
ENSELUP00000000536	ENSELUP00000005940	ENSELUP00000000536	ENSELUP00000005940	Usher syndrome 2A (autosomal recessive, mild).	Uncharacterized protein.	0.434
ENSELUP00000000536	ENSELUP00000005966	ENSELUP00000000536	ENSELUP00000005966	Usher syndrome 2A (autosomal recessive, mild).	Uncharacterized protein.	0.434
ENSELUP00000000536	ENSELUP00000009981	ENSELUP00000000536	ENSELUP00000009981	Usher syndrome 2A (autosomal recessive, mild).	Laminin, beta 2 (laminin S).	0.456
ENSELUP00000000536	ENSELUP00000029861	ENSELUP00000000536	ENSELUP00000029861	Usher syndrome 2A (autosomal recessive, mild).	Uncharacterized protein.	0.434
ENSELUP00000000536	ENSELUP00000035981	ENSELUP00000000536	ENSELUP00000035981	Usher syndrome 2A (autosomal recessive, mild).	Nidogen 1b.	0.434
ENSELUP00000000536	ENSELUP00000036665	ENSELUP00000000536	ENSELUP00000036665	Usher syndrome 2A (autosomal recessive, mild).	Nidogen 2a (osteonidogen).	0.434
ENSELUP00000000536	LAMB1	ENSELUP00000000536	ENSELUP00000037357	Usher syndrome 2A (autosomal recessive, mild).	Laminin, beta 1a.	0.456
ENSELUP00000000536	LOC105007961	ENSELUP00000000536	ENSELUP00000013280	Usher syndrome 2A (autosomal recessive, mild).	Laminin, beta 1b.	0.456