STRINGSTRING
znf622 znf622 rsl1d1 rsl1d1 znhit3 znhit3 nop53 nop53 dhx30 dhx30 lto1 lto1 LOC105027668 LOC105027668 fastkd2 fastkd2 SPATA5 SPATA5 ZNHIT6 ZNHIT6 ENSELUP00000035390 ENSELUP00000035390 Rrs1 Rrs1 rpl6 rpl6 nop16 nop16 rsl24d1 rsl24d1 mrpl20 mrpl20 ftsj3 ftsj3 brix1 brix1 wdr74 wdr74 nle1 nle1 sdad1 sdad1 RPL35 RPL35 wdr12 wdr12 RPL5 RPL5 malsu1 malsu1 pes1 pes1 rpf1 rpf1 ddx28 ddx28 LOC105024418 LOC105024418 heatr3 heatr3 rpl7 rpl7 pak1ip1 pak1ip1 nifk nifk mak16 mak16 ddx18 ddx18 noc2l noc2l mrto4 mrto4 rrp15 rrp15 nvl nvl mrpl1 mrpl1 gtf3a gtf3a eif6 eif6 znhit2 znhit2 nop2 nop2 LOC105013366 LOC105013366 rpl23a rpl23a rpf2 rpf2 LOC105024009 LOC105024009 urb1 urb1 mrm2 mrm2 rpl35 rpl35 rpl10 rpl10 ebna1bp2 ebna1bp2 nhp2 nhp2 bop1 bop1 LOC105028245 LOC105028245 lg10h1orf109 lg10h1orf109 rpl14 rpl14 nsa2 nsa2 rpl7l1 rpl7l1 spata5l1 spata5l1 cinp cinp LOC105018348 LOC105018348 LOC105015223 LOC105015223 nol9 nol9 gtpbp4 gtpbp4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
znf622Zinc finger protein 622. (492 aa)
rsl1d1Ribosomal L1 domain containing 1. (337 aa)
znhit3Zinc finger, HIT-type containing 3. (141 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (454 aa)
dhx30DEAH (Asp-Glu-Ala-His) box helicase 30. (1167 aa)
lto1Oral cancer overexpressed protein 1. (141 aa)
LOC105027668General transcription factor IIIAa. (401 aa)
fastkd2FAST kinase domains 2. (662 aa)
SPATA5Spermatogenesis associated 5. (935 aa)
ZNHIT6Zinc finger HIT-type containing 6. (474 aa)
ENSELUP00000035390TNF receptor-associated factor 7. (624 aa)
Rrs1Ribosome biogenesis regulator 1 homolog. (150 aa)
rpl6Ribosomal protein L6. (259 aa)
nop16NOP16 nucleolar protein homolog (yeast). (177 aa)
rsl24d1TRASH domain-containing protein. (181 aa)
mrpl2039S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (872 aa)
brix1Brix domain containing 2. (358 aa)
wdr74WD repeat domain 74. (379 aa)
nle1Notchless homolog 1 (Drosophila). (502 aa)
sdad1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (691 aa)
RPL35Ribosomal protein L35. (138 aa)
wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (402 aa)
RPL5Ribosomal protein L5. (301 aa)
malsu1Uncharacterized protein. (244 aa)
pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (588 aa)
rpf1Ribosome production factor 1 homolog. (416 aa)
ddx28DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. (569 aa)
LOC10502441860S ribosomal protein L26. (145 aa)
heatr3HEAT repeat containing 3. (682 aa)
rpl760S ribosomal protein L7. (245 aa)
pak1ip1PAK1 interacting protein 1. (362 aa)
nifkNucleolar protein interacting with the FHA domain of MKI67. (292 aa)
mak16Protein MAK16 homolog; Belongs to the MAK16 family. (306 aa)
ddx18RNA helicase. (671 aa)
noc2lNOC2-like nucleolar associated transcriptional repressor. (757 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
rrp15Ribosomal RNA processing 15 homolog. (313 aa)
nvlNuclear VCP like. (888 aa)
mrpl1Mitochondrial ribosomal protein L1. (331 aa)
gtf3aGeneral transcription factor IIIA, b. (318 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
znhit2Zinc finger, HIT-type containing 2. (616 aa)
nop2NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (745 aa)
LOC105013366Si:dkey-208k4.2. (401 aa)
rpl23aRibosomal protein L23a. (196 aa)
rpf2Brix domain-containing protein. (304 aa)
LOC105024009Ribosomal protein L5. (298 aa)
urb1URB1 ribosome biogenesis homolog. (2227 aa)
mrm2FtsJ domain-containing protein. (261 aa)
rpl35Uncharacterized protein. (153 aa)
rpl10Ribosomal_L16 domain-containing protein. (215 aa)
ebna1bp2EBNA1 binding protein 2. (331 aa)
nhp2NHP2 ribonucleoprotein homolog (yeast). (117 aa)
bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (788 aa)
LOC105028245Nucleophosmin 1b. (306 aa)
lg10h1orf109C19h1orf109 homolog (H. sapiens). (202 aa)
rpl14Ribosomal protein L14. (154 aa)
nsa2Ribosome biogenesis protein NSA2 homolog. (260 aa)
rpl7l1Ribosomal protein L7-like 1. (249 aa)
spata5l1Spermatogenesis associated 5-like 1. (777 aa)
cinpCyclin-dependent kinase 2 interacting protein. (216 aa)
LOC105018348Probable ribosome biogenesis protein RLP24. (163 aa)
LOC105015223Nucleophosmin/nucleoplasmin, 2b. (193 aa)
nol9Nucleolar protein 9. (718 aa)
gtpbp4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (667 aa)
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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