STRINGSTRING
aire aire LOC105011230 LOC105011230 LOC105022397 LOC105022397 smarcal1 smarcal1 msh6 msh6 LOC105027427 LOC105027427 smarca4 smarca4 polk polk LOC105020774 LOC105020774 ercc6 ercc6 ENSELUP00000008653 ENSELUP00000008653 dhx36 dhx36 LOC105007933 LOC105007933 rad1 rad1 LOC105025422 LOC105025422 ENSELUP00000008155 ENSELUP00000008155 rad51b rad51b mettl4 mettl4 ENDOV ENDOV LOC105013139 LOC105013139 ENSELUP00000007556 ENSELUP00000007556 ENSELUP00000007524 ENSELUP00000007524 ENSELUP00000007493 ENSELUP00000007493 ruvbl2 ruvbl2 LOC105018056 LOC105018056 ercc6l ercc6l LOC105016382 LOC105016382 polg2 polg2 mlh3 mlh3 rad17 rad17 ENSELUP00000005976 ENSELUP00000005976 xrcc3 xrcc3 LOC105010544 LOC105010544 lg04h11orf80 lg04h11orf80 ttf2 ttf2 mcm6 mcm6 fan1 fan1 LOC105017359 LOC105017359 Atrx Atrx rad51 rad51 knl1 knl1 helb helb pld4 pld4 rtel1 rtel1 ENSELUP00000002257 ENSELUP00000002257 neil1 neil1 tdg tdg polg polg pole pole gtf2f2 gtf2f2 MPHOSPH9 MPHOSPH9 LOC105013881 LOC105013881 msh2 msh2 n6amt1 n6amt1 ENSELUP00000000495 ENSELUP00000000495 ercc6l2 ercc6l2 RAD54L2 RAD54L2 dhx9 dhx9 chd5 chd5 ENSELUP00000032389 ENSELUP00000032389 twnk twnk mcm5 mcm5 msh5 msh5 LOC105026975 LOC105026975 ENSELUP00000031830 ENSELUP00000031830 polb polb LOC105019233 LOC105019233 rad54b rad54b mus81 mus81 top2b top2b mcm3 mcm3 ENSELUP00000031341 ENSELUP00000031341 bivm bivm polh polh rfc3 rfc3 Exo5 Exo5 ENSELUP00000030130 ENSELUP00000030130 Lig4 Lig4 ddx1 ddx1 fbh1 fbh1 chd9 chd9 fto fto ankle1 ankle1 primpol primpol ENSELUP00000028183 ENSELUP00000028183 ENSELUP00000028142 ENSELUP00000028142 poll poll LOC105021611 LOC105021611 ENSELUP00000027643 ENSELUP00000027643 haus3 haus3 ENSELUP00000027570 ENSELUP00000027570 LOC105017441 LOC105017441 LOC105009541 LOC105009541 LOC105029149 LOC105029149 ercc3 ercc3 LOC105013882 LOC105013882 ENSELUP00000026612 ENSELUP00000026612 LOC105026399 LOC105026399 LOC105013965 LOC105013965 rad9a rad9a LOC105010844 LOC105010844 LOC105028924 LOC105028924 chd7 chd7 Msh3 Msh3 ENSELUP00000025085 ENSELUP00000025085 dnmt1 dnmt1 ascc3 ascc3 ENSELUP00000024408 ENSELUP00000024408 smc3 smc3 top3b top3b exd2 exd2 recql4 recql4 mpg mpg apex1 apex1 ddx11 ddx11 apex2 apex2 LOC105025851 LOC105025851 mcm9 mcm9 alkbh2 alkbh2 ung ung rad51c rad51c hmga2 hmga2 mlh1 mlh1 APLF APLF recql recql top2a top2a LOC105027758 LOC105027758 dclre1c dclre1c mre11 mre11 LOC105028962 LOC105028962 rad54l rad54l ENSELUP00000042106 ENSELUP00000042106 ogg1 ogg1 polm polm dicer1 dicer1 LOC105015448 LOC105015448 rad9b rad9b mcm7 mcm7 dclre1a dclre1a dnase2 dnase2 alkbh4 alkbh4 mgme1 mgme1 pld3 pld3 ENSELUP00000033878 ENSELUP00000033878 lig1 lig1 top3a top3a ENSELUP00000035354 ENSELUP00000035354 dkc1 dkc1 pgbd5 pgbd5 DNASE1L3 DNASE1L3 ENSELUP00000021469 ENSELUP00000021469 ENSELUP00000021334 ENSELUP00000021334 cry1 cry1 Aptx Aptx rexo2 rexo2 wrnip1 wrnip1 ENSELUP00000020281 ENSELUP00000020281 pif1 pif1 LOC105025728 LOC105025728 lig3 lig3 rad51d rad51d LOC105014983 LOC105014983 ercc4 ercc4 blm blm mcm2 mcm2 dntt dntt LOC105015403 LOC105015403 Hfm1 Hfm1 meiob meiob supv3l1 supv3l1 smarcad1 smarcad1 DNA2 DNA2 ENSELUP00000018876 ENSELUP00000018876 EXOG EXOG ENSELUP00000018284 ENSELUP00000018284 chd1 chd1 tatdn1 tatdn1 LOC105011061 LOC105011061 LOC105011047 LOC105011047 dffb dffb XRCC2 XRCC2 nthl1 nthl1 spo11 spo11 ENSELUP00000016759 ENSELUP00000016759 tdp2 tdp2 LOC105024976 LOC105024976 ENSELUP00000015834 ENSELUP00000015834 tert tert LOC105018596 LOC105018596 SMARCA5 SMARCA5 LOC105024246 LOC105024246 zranb3 zranb3 exo1 exo1 pms1 pms1 kiaa1257 kiaa1257 dnase1 dnase1 mcm8 mcm8 pold1 pold1 hells hells hltf hltf MUTYH MUTYH endog endog ruvbl1 ruvbl1 ENSELUP00000037121 ENSELUP00000037121 LOC105013490 LOC105013490 alkbh1 alkbh1 recql5 recql5 wrn wrn chd2 chd2 pms2 pms2 tdp1 tdp1 ercc2 ercc2 ENSELUP00000038206 ENSELUP00000038206 gen1 gen1 smc6 smc6 LOC105018167 LOC105018167 ENSELUP00000038519 ENSELUP00000038519 mbd4 mbd4 btaf1 btaf1 shprh shprh dmc1 dmc1 ENSELUP00000039300 ENSELUP00000039300 ENSELUP00000039322 ENSELUP00000039322 smug1 smug1 Rev1 Rev1 xrcc6 xrcc6 fen1 fen1 DNASE1L1 DNASE1L1 neil3 neil3 mcm4 mcm4
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
aireAutoimmune regulator. (445 aa)
LOC105011230RAD50 homolog, double strand break repair protein. (1314 aa)
LOC105022397DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1568 aa)
smarcal1Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (1041 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1387 aa)
LOC105027427SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1577 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1636 aa)
polkPolymerase (DNA directed) kappa. (913 aa)
LOC105020774Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (266 aa)
ercc6Excision repair cross-complementation group 6. (1494 aa)
ENSELUP00000008653Uncharacterized protein. (305 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1050 aa)
LOC105007933Snf2-related CREBBP activator protein. (2881 aa)
rad1Cell cycle checkpoint protein RAD1. (280 aa)
LOC105025422Uncharacterized protein. (118 aa)
ENSELUP00000008155DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (873 aa)
rad51bRAD51 paralog B. (378 aa)
mettl4Methyltransferase like 4; Belongs to the MT-A70-like family. (463 aa)
ENDOVEndonuclease V. (296 aa)
LOC105013139ATPase family AAA domain containing 5a. (1854 aa)
ENSELUP00000007556Uncharacterized protein. (235 aa)
ENSELUP00000007524Uncharacterized protein. (298 aa)
ENSELUP00000007493Uncharacterized protein. (285 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
LOC105018056DNA (cytosine-5-)-methyltransferase 3 alpha a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (686 aa)
ercc6lExcision repair cross-complementation group 6-like. (1302 aa)
LOC105016382General transcription factor IIF, polypeptide 2b. (248 aa)
polg2Polymerase (DNA directed), gamma 2, accessory subunit. (463 aa)
mlh3MutL homolog 3 (E. coli). (1272 aa)
rad17RAD17 checkpoint clamp loader component. (699 aa)
ENSELUP00000005976BRCA1 interacting protein C-terminal helicase 1. (941 aa)
xrcc3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (361 aa)
LOC105010544PHD-type domain-containing protein. (1344 aa)
lg04h11orf80Uncharacterized protein. (459 aa)
ttf2Uncharacterized protein. (1098 aa)
mcm6DNA helicase; Belongs to the MCM family. (821 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1105 aa)
LOC105017359DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (754 aa)
AtrxATRX chromatin remodeler. (2039 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
knl1Knl1_RWD_C domain-containing protein. (1650 aa)
helbHelicase (DNA) B. (1242 aa)
pld4Phospholipase D family member 4. (515 aa)
rtel1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1198 aa)
ENSELUP00000002257Uncharacterized protein. (1610 aa)
neil1Nei-like DNA glycosylase 1. (399 aa)
tdgThymine DNA glycosylase, tandem duplicate 1. (479 aa)
polgPolymerase (DNA directed), gamma. (1211 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (1982 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (275 aa)
MPHOSPH9Uncharacterized protein. (1375 aa)
LOC105013881DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1492 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (962 aa)
n6amt1N-6 adenine-specific DNA methyltransferase 1. (213 aa)
ENSELUP00000000495Helicase, POLQ like. (980 aa)
ercc6l2Excision repair cross-complementation group 6-like 2. (1496 aa)
RAD54L2RAD54 like 2. (1421 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1270 aa)
chd5Chromodomain helicase DNA binding protein 5. (1804 aa)
ENSELUP00000032389Uncharacterized protein. (476 aa)
twnkTwinkle mtDNA helicase. (750 aa)
mcm5DNA helicase; Belongs to the MCM family. (739 aa)
msh5MutS homolog 5. (750 aa)
LOC105026975Uncharacterized protein. (1586 aa)
ENSELUP00000031830RAD54 like 2. (857 aa)
polbDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (336 aa)
LOC105019233Tyrosyl-DNA phosphodiesterase 2a. (432 aa)
rad54bRAD54 homolog B. (930 aa)
mus81MUS81 structure-specific endonuclease subunit. (617 aa)
top2bDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1612 aa)
mcm3DNA helicase; Belongs to the MCM family. (812 aa)
ENSELUP00000031341DNA polymerase. (1412 aa)
bivmBasic, immunoglobulin-like variable motif containing. (600 aa)
polhPolymerase (DNA directed), eta. (779 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
Exo5Exonuclease 5. (421 aa)
ENSELUP00000030130Replication factor C subunit 1. (1033 aa)
Lig4DNA ligase. (912 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (741 aa)
fbh1F-box DNA helicase 1. (1030 aa)
chd9Chromodomain helicase DNA binding protein 9. (2517 aa)
ftoFTO alpha-ketoglutarate dependent dioxygenase. (559 aa)
ankle1Zgc:85936. (1233 aa)
primpolPrimase and polymerase (DNA-directed). (592 aa)
ENSELUP00000028183C2H2-type domain-containing protein. (1011 aa)
ENSELUP00000028142Reverse transcriptase domain-containing protein. (934 aa)
pollPolymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (597 aa)
LOC105021611Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2588 aa)
ENSELUP00000027643Polymerase (DNA directed) nu. (719 aa)
haus3HAUS augmin-like complex, subunit 3. (666 aa)
ENSELUP00000027570Cryptochrome DASH. (440 aa)
LOC105017441SET domain and mariner transposase fusion gene. (299 aa)
LOC105009541Thymine DNA glycosylase, tandem duplicate 2. (440 aa)
LOC105029149Phospholipase D family, member 7. (847 aa)
ercc3Excision repair cross-complementation group 3. (785 aa)
LOC105013882DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (830 aa)
ENSELUP00000026612Excision repair cross-complementation group 5. (1138 aa)
LOC105026399DNA helicase; Belongs to the MCM family. (813 aa)
LOC105013965DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (766 aa)
rad9aRAD9 checkpoint clamp component A. (352 aa)
LOC105010844Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (246 aa)
LOC105028924Zgc:66475. (550 aa)
chd7Chromodomain helicase DNA binding protein 7. (2804 aa)
Msh3MutS homolog 3 (E. coli); Component of the post-replicative DNA mismatch repair system (MMR). (931 aa)
ENSELUP00000025085Uncharacterized protein. (160 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1530 aa)
ascc3Activating signal cointegrator 1 complex subunit 3. (2212 aa)
ENSELUP00000024408Uncharacterized protein. (1479 aa)
smc3Structural maintenance of chromosomes protein. (1216 aa)
top3bDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (845 aa)
exd2Exonuclease 3'-5' domain containing 2. (660 aa)
recql4RecQ helicase-like 4. (1558 aa)
mpgN-methylpurine DNA glycosylase. (276 aa)
apex1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (312 aa)
ddx11DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (900 aa)
apex2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (582 aa)
LOC105025851Chromodomain helicase DNA binding protein 4a. (1825 aa)
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1418 aa)
alkbh2AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase. (263 aa)
ungUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (303 aa)
rad51cRAD51 paralog C. (359 aa)
hmga2High mobility group AT-hook 2. (112 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (715 aa)
APLFAprataxin and PNKP like factor. (513 aa)
recqlATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (834 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1504 aa)
LOC105027758Deoxyribonuclease; Belongs to the DNase I family. (309 aa)
dclre1cDNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (696 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (702 aa)
LOC105028962SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1021 aa)
rad54lRAD54 like. (745 aa)
ENSELUP00000042106Immunoglobulin mu DNA binding protein 2. (965 aa)
ogg18-oxoguanine DNA glycosylase. (407 aa)
polmDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (531 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1865 aa)
LOC105015448DNA (cytosine-5-)-methyltransferase 3 alpha b; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1029 aa)
rad9bRAD9 checkpoint clamp component B. (383 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (730 aa)
dclre1aDNA cross-link repair 1A (PSO2 homolog, S. cerevisiae). (950 aa)
dnase2Deoxyribonuclease II, lysosomal. (405 aa)
alkbh4AlkB homolog 4, lysine demthylase. (270 aa)
mgme1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (343 aa)
pld3Phospholipase D family, member 3. (485 aa)
ENSELUP00000033878Chromodomain helicase DNA binding protein 6. (2063 aa)
lig1DNA ligase. (1069 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1033 aa)
ENSELUP00000035354DNA cross-link repair 1B. (598 aa)
dkc1Dyskeratosis congenita 1, dyskerin. (507 aa)
pgbd5PiggyBac transposable element derived 5. (519 aa)
DNASE1L3Deoxyribonuclease 1 like 3. (331 aa)
ENSELUP00000021469INO80 complex ATPase subunit. (1485 aa)
ENSELUP00000021334E1A binding protein p400. (2826 aa)
cry1Cryptochrome circadian regulator 1b. (565 aa)
AptxFHA_2 domain-containing protein. (82 aa)
rexo2Small fragment nuclease. (289 aa)
wrnip1WRN helicase interacting protein 1. (615 aa)
ENSELUP00000020281Uncharacterized protein. (117 aa)
pif1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (682 aa)
LOC105025728DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (834 aa)
lig3DNA ligase. (1020 aa)
rad51dDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (335 aa)
LOC105014983Uncharacterized protein. (981 aa)
ercc4Excision repair cross-complementation group 4. (892 aa)
blmBLM RecQ like helicase. (1473 aa)
mcm2DNA helicase; Belongs to the MCM family. (887 aa)
dnttDNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (499 aa)
LOC105015403Structural maintenance of chromosomes 6. (1082 aa)
Hfm1Helicase for meiosis 1. (933 aa)
meiobMethionine sulfoxide reductase B1b. (471 aa)
supv3l1SUV3-like helicase. (779 aa)
smarcad1Uncharacterized protein. (1017 aa)
DNA2DNA replication helicase/nuclease 2. (1421 aa)
ENSELUP00000018876REV3 like, DNA directed polymerase zeta catalytic subunit. (2835 aa)
EXOGExo/endonuclease G. (362 aa)
ENSELUP00000018284Endo/exonuclease/phosphatase domain-containing protein. (185 aa)
chd1Chromodomain helicase DNA binding protein 1. (1821 aa)
tatdn1TatD DNase domain containing 1. (323 aa)
LOC105011061Remodeling and spacing factor 1b, tandem duplicate 1. (1807 aa)
LOC105011047KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (245 aa)
dffbCIDE-N domain-containing protein. (335 aa)
XRCC2X-ray repair cross complementing 2. (316 aa)
nthl1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (439 aa)
spo11SPO11 initiator of meiotic double stranded breaks. (428 aa)
ENSELUP00000016759Uncharacterized protein. (101 aa)
tdp2Tyrosyl-DNA phosphodiesterase 2b. (380 aa)
LOC105024976Zgc:110269. (350 aa)
ENSELUP00000015834Uncharacterized protein. (1794 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1129 aa)
LOC105018596DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (562 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (982 aa)
LOC105024246DNA helicase; Belongs to the MCM family. (823 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1168 aa)
exo1Exonuclease 1. (801 aa)
pms1PMS1 homolog 1, mismatch repair system component. (911 aa)
kiaa1257Si:dkey-57n24.6. (1212 aa)
dnase1Deoxyribonuclease; Belongs to the DNase I family. (286 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (820 aa)
pold1DNA polymerase. (1105 aa)
hellsHelicase, lymphoid specific. (856 aa)
hltfHelicase-like transcription factor. (952 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (522 aa)
endogEndonuclease. (310 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
ENSELUP00000037121Chromodomain helicase DNA binding protein 1-like. (980 aa)
LOC105013490Deoxyribonuclease; Belongs to the DNase I family. (296 aa)
alkbh1AlkB homolog 1, histone H2A dioxygenase. (405 aa)
recql5RecQ helicase-like 5. (1029 aa)
wrnWRN RecQ like helicase. (1484 aa)
chd2Chromodomain helicase DNA binding protein 2. (1824 aa)
pms2PMS1 homolog 2, mismatch repair system component. (918 aa)
tdp1Tyrosyl-DNA phosphodiesterase 1. (629 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
ENSELUP00000038206Uncharacterized protein. (1826 aa)
gen1Uncharacterized protein. (1014 aa)
smc6Si:dkey-119f1.1. (1078 aa)
LOC105018167CECR2 histone acetyl-lysine reader. (1194 aa)
ENSELUP00000038519Polymerase (DNA directed), theta. (1575 aa)
mbd4MBD domain-containing protein. (589 aa)
btaf1BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1834 aa)
shprhSNF2 histone linker PHD RING helicase. (1626 aa)
dmc1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (342 aa)
ENSELUP00000039300Uncharacterized protein. (94 aa)
ENSELUP00000039322Chromodomain helicase DNA binding protein 3. (1567 aa)
smug1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (337 aa)
Rev1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (917 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (610 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
DNASE1L1Deoxyribonuclease; Belongs to the DNase I family. (270 aa)
neil3Nei-like DNA glycosylase 3. (610 aa)
mcm4DNA helicase; Belongs to the MCM family. (858 aa)
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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