31 items (Esox lucius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	rpa3	Uncharacterized protein. (121 aa)
	polh	Polymerase (DNA directed), eta. (779 aa)
	ufd1	Ubiquitin fusion degradation protein 1 homolog. (309 aa)
	kxd1	KxDL motif containing 1. (187 aa)
	LOC105013139	ATPase family AAA domain containing 5a. (1854 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	LOC105026211	Ubiquitin-like domain-containing protein. (128 aa)
	rfc5	AAA domain-containing protein. (335 aa)
	ENSELUP00000003468	Ubiquitin-like domain-containing protein. (86 aa)
	rps27a	Ribosomal protein S27a. (177 aa)
	LOC105006106	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	Nploc4	NPL4 homolog, ubiquitin recognition factor. (594 aa)
	LOC105025565	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	sprtn	SprT-like N-terminal domain. (589 aa)
	SPATA5	Spermatogenesis associated 5. (935 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	rfc2	Replication factor C (activator 1) 2. (368 aa)
	ENSELUP00000014517	Zgc:136908; Belongs to the AAA ATPase family. (766 aa)
	rpa2	Replication protein A2. (299 aa)
	meiob	Methionine sulfoxide reductase B1b. (471 aa)
	LOC105025682	Si:dkey-24l11.2. (691 aa)
	LOC105024444	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
	LOC105006037	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (520 aa)
	rchy1	Ring finger and CHY zinc finger domain containing 1. (292 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (777 aa)
	LOC105019838	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (583 aa)
	LOC105028498	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (505 aa)
	rfc4	Replication factor C (activator 1) 4. (376 aa)
	ENSELUP00000030130	Replication factor C subunit 1. (1033 aa)

Your Current Organism:

Esox lucius

NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSELUP00000003468	ENSELUP00000014517	ENSELUP00000003468	ENSELUP00000014517	Ubiquitin-like domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.868
ENSELUP00000003468	ENSELUP00000030130	ENSELUP00000003468	ENSELUP00000030130	Ubiquitin-like domain-containing protein.	Replication factor C subunit 1.	0.685
ENSELUP00000003468	LOC105006106	ENSELUP00000003468	ENSELUP00000000987	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.868
ENSELUP00000003468	LOC105013139	ENSELUP00000003468	ENSELUP00000007630	Ubiquitin-like domain-containing protein.	ATPase family AAA domain containing 5a.	0.427
ENSELUP00000003468	LOC105024444	ENSELUP00000003468	ENSELUP00000021935	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.974
ENSELUP00000003468	LOC105025565	ENSELUP00000003468	ENSELUP00000033218	Ubiquitin-like domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.868
ENSELUP00000003468	LOC105025682	ENSELUP00000003468	ENSELUP00000019411	Ubiquitin-like domain-containing protein.	Si:dkey-24l11.2.	0.469
ENSELUP00000003468	LOC105026211	ENSELUP00000003468	ENSELUP00000034480	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.974
ENSELUP00000003468	LOC105028498	ENSELUP00000003468	ENSELUP00000029262	Ubiquitin-like domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.552
ENSELUP00000003468	Nploc4	ENSELUP00000003468	ENSELUP00000032698	Ubiquitin-like domain-containing protein.	NPL4 homolog, ubiquitin recognition factor.	0.964
ENSELUP00000003468	SPATA5	ENSELUP00000003468	ENSELUP00000041432	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5.	0.868
ENSELUP00000003468	kxd1	ENSELUP00000003468	ENSELUP00000003987	Ubiquitin-like domain-containing protein.	KxDL motif containing 1.	0.714
ENSELUP00000003468	pcna	ENSELUP00000003468	ENSELUP00000007729	Ubiquitin-like domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.959
ENSELUP00000003468	polh	ENSELUP00000003468	ENSELUP00000031121	Ubiquitin-like domain-containing protein.	Polymerase (DNA directed), eta.	0.946
ENSELUP00000003468	rchy1	ENSELUP00000003468	ENSELUP00000025903	Ubiquitin-like domain-containing protein.	Ring finger and CHY zinc finger domain containing 1.	0.694
ENSELUP00000003468	rfc2	ENSELUP00000003468	ENSELUP00000014257	Ubiquitin-like domain-containing protein.	Replication factor C (activator 1) 2.	0.674
ENSELUP00000003468	rfc3	ENSELUP00000003468	ENSELUP00000030603	Ubiquitin-like domain-containing protein.	Replication factor C (activator 1) 3.	0.675
ENSELUP00000003468	rfc4	ENSELUP00000003468	ENSELUP00000008564	Ubiquitin-like domain-containing protein.	Replication factor C (activator 1) 4.	0.674
ENSELUP00000003468	rfc5	ENSELUP00000003468	ENSELUP00000003484	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.674
ENSELUP00000003468	rpa1	ENSELUP00000003468	ENSELUP00000022084	Ubiquitin-like domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.552