22 items (Esox lucius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dis3	DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (952 aa)
	fubp1	Far upstream element (FUSE) binding protein 1. (662 aa)
	exosc8	Exosome component 8. (277 aa)
	exosc9	Exosome component 9. (436 aa)
	LOC105021541	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (435 aa)
	akt3	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
	exosc2	Exosome component 2. (295 aa)
	LOC105015013	Far upstream element (FUSE) binding protein 3. (600 aa)
	LOC105012055	KH-type splicing regulatory protein. (668 aa)
	dcp2	Decapping mRNA 2. (412 aa)
	dis3l	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1070 aa)
	exosc4	Exosome complex exonuclease RRP41. (245 aa)
	dis3l2	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1056 aa)
	exosc7	Uncharacterized protein. (304 aa)
	LOC105013140	Uncharacterized protein. (666 aa)
	LOC105030200	Uncharacterized protein. (580 aa)
	toe1	Target of EGR1, exonuclease. (527 aa)
	parn	Poly(A)-specific ribonuclease (deadenylation nuclease). (754 aa)
	exosc6	Exosome complex exonuclease MTR3. (277 aa)
	exosc1	Exosome component 1. (249 aa)
	exosc5	Exosome component 5. (225 aa)
	exosc3	Exosome component 3. (241 aa)

Your Current Organism:

Esox lucius

NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105012055	LOC105021541	ENSELUP00000016506	ENSELUP00000012831	KH-type splicing regulatory protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.405
LOC105012055	akt3	ENSELUP00000016506	ENSELUP00000013324	KH-type splicing regulatory protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.405
LOC105012055	dcp2	ENSELUP00000016506	ENSELUP00000017088	KH-type splicing regulatory protein.	Decapping mRNA 2.	0.528
LOC105012055	dis3	ENSELUP00000016506	ENSELUP00000000750	KH-type splicing regulatory protein.	DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.483
LOC105012055	exosc2	ENSELUP00000016506	ENSELUP00000013516	KH-type splicing regulatory protein.	Exosome component 2.	0.513
LOC105012055	exosc3	ENSELUP00000016506	ENSELUP00000042144	KH-type splicing regulatory protein.	Exosome component 3.	0.476
LOC105012055	exosc4	ENSELUP00000016506	ENSELUP00000022015	KH-type splicing regulatory protein.	Exosome complex exonuclease RRP41.	0.484
LOC105012055	exosc5	ENSELUP00000016506	ENSELUP00000041040	KH-type splicing regulatory protein.	Exosome component 5.	0.508
LOC105012055	exosc6	ENSELUP00000016506	ENSELUP00000036259	KH-type splicing regulatory protein.	Exosome complex exonuclease MTR3.	0.475
LOC105012055	exosc7	ENSELUP00000016506	ENSELUP00000030042	KH-type splicing regulatory protein.	Uncharacterized protein.	0.482
LOC105012055	exosc8	ENSELUP00000016506	ENSELUP00000007910	KH-type splicing regulatory protein.	Exosome component 8.	0.472
LOC105012055	parn	ENSELUP00000016506	ENSELUP00000034535	KH-type splicing regulatory protein.	Poly(A)-specific ribonuclease (deadenylation nuclease).	0.637
LOC105012055	toe1	ENSELUP00000016506	ENSELUP00000033913	KH-type splicing regulatory protein.	Target of EGR1, exonuclease.	0.441
LOC105013140	LOC105021541	ENSELUP00000031001	ENSELUP00000012831	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.405
LOC105013140	akt3	ENSELUP00000031001	ENSELUP00000013324	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.405
LOC105013140	dcp2	ENSELUP00000031001	ENSELUP00000017088	Uncharacterized protein.	Decapping mRNA 2.	0.528
LOC105013140	dis3	ENSELUP00000031001	ENSELUP00000000750	Uncharacterized protein.	DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.483
LOC105013140	exosc2	ENSELUP00000031001	ENSELUP00000013516	Uncharacterized protein.	Exosome component 2.	0.513
LOC105013140	exosc3	ENSELUP00000031001	ENSELUP00000042144	Uncharacterized protein.	Exosome component 3.	0.476
LOC105013140	exosc4	ENSELUP00000031001	ENSELUP00000022015	Uncharacterized protein.	Exosome complex exonuclease RRP41.	0.484