STRINGSTRING
ENSELUP00000037121 ENSELUP00000037121 gtf2h5 gtf2h5 parp3 parp3 gtf2h4 gtf2h4 ercc2 ercc2 nfrkb nfrkb RCBTB1 RCBTB1 cops2 cops2 ercc3 ercc3 ENSELUP00000026612 ENSELUP00000026612 cul4a cul4a ddb1 ddb1 nfatc2ip nfatc2ip ino80d ino80d ddb2 ddb2 LOC105006037 LOC105006037 LOC105011463 LOC105011463 parp2 parp2 pold2 pold2 cops4 cops4 pole pole LOC105005930 LOC105005930 COPS6 COPS6 GPS1 GPS1 gtf2h1 gtf2h1 ENSELUP00000022977 ENSELUP00000022977 pole4 pole4 XPA XPA usp45 usp45 LOC105028167 LOC105028167 rpa3 rpa3 LOC105022147 LOC105022147 LOC105005843 LOC105005843 cops3 cops3 ENSELUP00000004482 ENSELUP00000004482 kxd1 kxd1 rfc5 rfc5 ENSELUP00000003468 ENSELUP00000003468 rps27a rps27a rpap3 rpap3 parp1 parp1 LOC105021051 LOC105021051 rpa2 rpa2 meiob meiob sumo1 sumo1 pold3 pold3 ercc4 ercc4 LOC105021082 LOC105021082 cops7a cops7a pole3 pole3 cul4b cul4b ENSELUP00000021469 ENSELUP00000021469 pold4 pold4 mcrs1 mcrs1 LOC105024444 LOC105024444 rpa1 rpa1 LOC105013396 LOC105013396 LOC105013624 LOC105013624 ube2v2 ube2v2 LOC105029658 LOC105029658 ENSELUP00000031865 ENSELUP00000031865 kctd2 kctd2 bivm bivm ino80c ino80c rfc3 rfc3 rbx1 rbx1 ENSELUP00000030130 ENSELUP00000030130 LOC105012271 LOC105012271 LOC105028498 LOC105028498 LOC105018362 LOC105018362 cetn3 cetn3 LOC105019838 LOC105019838 ino80b ino80b rad23a rad23a SUMO3 SUMO3 cops8 cops8 polk polk UBE2I UBE2I vwa5b2 vwa5b2 SUMO3-2 SUMO3-2 LOC105031328 LOC105031328 LOC105031069 LOC105031069 xpc xpc actr8 actr8 YY1 YY1 LOC105015025 LOC105015025 pold1 pold1 LOC105012846 LOC105012846 actr5 actr5 rfc2 rfc2 tfpt tfpt cops5 cops5 ENSELUP00000015817 ENSELUP00000015817 gtf2h3 gtf2h3 pole2 pole2 LOC105015976 LOC105015976 rfc4 rfc4 pcna pcna LOC105013139 LOC105013139 LOC105023538 LOC105023538 sumo2 sumo2 gtf2h2c gtf2h2c ino80e ino80e LOC105021031 LOC105021031 cdk7 cdk7 LOC105007016 LOC105007016 mnat1 mnat1 LOC105026211 LOC105026211 rnf111 rnf111 ercc1 ercc1 LOC105029642 LOC105029642 ccnh ccnh ruvbl1 ruvbl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSELUP00000037121Chromodomain helicase DNA binding protein 1-like. (980 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
parp3Poly [ADP-ribose] polymerase. (553 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
nfrkbNuclear factor related to kappaB binding protein. (1278 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
cops2PCI domain-containing protein. (443 aa)
ercc3Excision repair cross-complementation group 3. (785 aa)
ENSELUP00000026612Excision repair cross-complementation group 5. (1138 aa)
cul4aCullin 4A; Belongs to the cullin family. (760 aa)
ddb1Damage-specific DNA binding protein 1. (1139 aa)
nfatc2ipNuclear factor of activated T cells 2 interacting protein. (310 aa)
ino80dINO80 complex subunit Da. (992 aa)
ddb2Damage-specific DNA binding protein 2. (518 aa)
LOC105006037Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (520 aa)
LOC105011463RAD23 homolog A, nucleotide excision repair protein b. (476 aa)
parp2Poly [ADP-ribose] polymerase. (691 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (473 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (421 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (1982 aa)
LOC105005930Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
COPS6COP9 signalosome subunit 6. (324 aa)
GPS1G protein pathway suppressor 1. (488 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
ENSELUP00000022977Chemokine (C-C motif) ligand 44. (126 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (165 aa)
XPAXPA, DNA damage recognition and repair factor. (272 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (786 aa)
LOC105028167Centrin 4. (171 aa)
rpa3Uncharacterized protein. (121 aa)
LOC105022147UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (162 aa)
LOC105005843Protein inhibitor of activated STAT 1. (685 aa)
cops3COP9 signalosome subunit 3. (463 aa)
ENSELUP00000004482Si:ch73-290k24.6. (283 aa)
kxd1KxDL motif containing 1. (187 aa)
rfc5AAA domain-containing protein. (335 aa)
ENSELUP00000003468Ubiquitin-like domain-containing protein. (86 aa)
rps27aRibosomal protein S27a. (177 aa)
rpap3RNA polymerase II associated protein 3. (663 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (972 aa)
LOC105021051Uncharacterized protein. (531 aa)
rpa2Replication protein A2. (299 aa)
meiobMethionine sulfoxide reductase B1b. (471 aa)
sumo1Small ubiquitin-related modifier. (102 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (450 aa)
ercc4Excision repair cross-complementation group 4. (892 aa)
LOC105021082Xeroderma pigmentosum, complementation group A. (272 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (278 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (151 aa)
cul4bCullin 4B; Belongs to the cullin family. (858 aa)
ENSELUP00000021469INO80 complex ATPase subunit. (1485 aa)
pold4Si:dkey-28b4.7. (109 aa)
mcrs1Microspherule protein 1. (476 aa)
LOC105024444Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
LOC105013396UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
LOC105013624Protein inhibitor of activated STAT 1. (732 aa)
ube2v2UBIQUITIN_CONJUGAT_2 domain-containing protein. (165 aa)
LOC105029658UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ENSELUP00000031865Si:cabz01080528.1. (762 aa)
kctd2Potassium channel tetramerization domain containing 2. (266 aa)
bivmBasic, immunoglobulin-like variable motif containing. (600 aa)
ino80cINO80 complex subunit C. (216 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
rbx1Zf-rbx1 domain-containing protein. (135 aa)
ENSELUP00000030130Replication factor C subunit 1. (1033 aa)
LOC105012271Small ubiquitin-related modifier. (96 aa)
LOC105028498Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (505 aa)
LOC105018362COP9 signalosome subunit 2. (450 aa)
cetn3Centrin 3. (167 aa)
LOC105019838Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (583 aa)
ino80bINO80 complex subunit B. (318 aa)
rad23aRAD23 homolog A, nucleotide excision repair protein a. (356 aa)
SUMO3Small ubiquitin-related modifier. (94 aa)
cops8COP9 signalosome subunit 8. (192 aa)
polkPolymerase (DNA directed) kappa. (913 aa)
UBE2IUbiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
vwa5b2Von Willebrand factor A domain containing 5B2. (1422 aa)
SUMO3-2Small ubiquitin-related modifier. (94 aa)
LOC105031328G protein pathway suppressor 1. (488 aa)
LOC105031069Actin, beta 2. (375 aa)
xpcXeroderma pigmentosum, complementation group C. (931 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (630 aa)
YY1YY1 transcription factor b. (385 aa)
LOC105015025WW domain binding protein 1. (279 aa)
pold1DNA polymerase. (1105 aa)
LOC105012846Uncharacterized protein. (376 aa)
actr5Actin related protein 5; Belongs to the actin family. (605 aa)
rfc2Replication factor C (activator 1) 2. (368 aa)
tfptUncharacterized protein. (206 aa)
cops5COP9 signalosome subunit 5. (334 aa)
ENSELUP00000015817annotation not available (117 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (304 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
LOC105015976YY1 transcription factor. (367 aa)
rfc4Replication factor C (activator 1) 4. (376 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC105013139ATPase family AAA domain containing 5a. (1854 aa)
LOC105023538RAD23 homolog B, nucleotide excision repair protein. (388 aa)
sumo2Small ubiquitin like modifier 2b. (149 aa)
gtf2h2cGeneral transcription factor IIH subunit. (391 aa)
ino80eINO80 complex subunit E. (225 aa)
LOC105021031PCI domain-containing protein. (269 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (361 aa)
LOC105007016Small ubiquitin-related modifier. (108 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (310 aa)
LOC105026211Ubiquitin-like domain-containing protein. (128 aa)
rnf111Ring finger protein 111. (1029 aa)
ercc1Excision repair cross-complementation group 1. (364 aa)
LOC105029642Actin beta. (370 aa)
ccnhCyclin H; Belongs to the cyclin family. (323 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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