16 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060VTF6	t-SNARE coiled-coil homology domain-containing protein. (228 aa)
	A0A060W3Z5	Uncharacterized protein. (361 aa)
	A0A060WAU9	Uncharacterized protein. (75 aa)
	A0A060WWI2	Uncharacterized protein. (1132 aa)
	A0A060XPL2	Uncharacterized protein. (56 aa)
	A0A060XQ48	SH3 domain-containing protein. (379 aa)
	A0A060XT15	WH2 domain-containing protein. (486 aa)
	A0A060YFG8	Uncharacterized protein. (107 aa)
	A0A060YN84	Uncharacterized protein. (91 aa)
	A0A060YSR4	Uncharacterized protein. (165 aa)
	A0A060YXA7	Uncharacterized protein. (315 aa)
	A0A060Z319	Uncharacterized protein. (278 aa)
	A0A060Z441	Uncharacterized protein. (172 aa)
	A0A060Z4J2	Uncharacterized protein. (75 aa)
	A0A060Z9D0	Uncharacterized protein. (444 aa)
	A0A060ZA74	WH2 domain-containing protein. (270 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VTF6	A0A060W3Z5	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.949
A0A060VTF6	A0A060WAU9	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.974
A0A060VTF6	A0A060WWI2	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.949
A0A060VTF6	A0A060XPL2	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.764
A0A060VTF6	A0A060XQ48	t-SNARE coiled-coil homology domain-containing protein.	SH3 domain-containing protein.	0.764
A0A060VTF6	A0A060XT15	t-SNARE coiled-coil homology domain-containing protein.	WH2 domain-containing protein.	0.952
A0A060VTF6	A0A060YFG8	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.860
A0A060VTF6	A0A060YN84	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.981
A0A060VTF6	A0A060YSR4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.952
A0A060VTF6	A0A060YXA7	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.939
A0A060VTF6	A0A060Z319	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.954
A0A060VTF6	A0A060Z4J2	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.974
A0A060VTF6	A0A060Z9D0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.964
A0A060VTF6	A0A060ZA74	t-SNARE coiled-coil homology domain-containing protein.	WH2 domain-containing protein.	0.860
A0A060W3Z5	A0A060VTF6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.949
A0A060W3Z5	A0A060WAU9	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A060W3Z5	A0A060XPL2	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A060W3Z5	A0A060XQ48	Uncharacterized protein.	SH3 domain-containing protein.	0.908
A0A060W3Z5	A0A060XT15	Uncharacterized protein.	WH2 domain-containing protein.	0.950
A0A060W3Z5	A0A060YFG8	Uncharacterized protein.	Uncharacterized protein.	0.950