STRINGSTRING
A0A060VME6 A0A060VME6 A0A060VSY0 A0A060VSY0 A0A060VSZ8 A0A060VSZ8 A0A060VUK6 A0A060VUK6 A0A060W2M1 A0A060W2M1 LSM1 LSM1 LSM4 LSM4 A0A060W9A4 A0A060W9A4 A0A060WEQ7 A0A060WEQ7 LSM5 LSM5 A0A060WM97 A0A060WM97 A0A060WS68 A0A060WS68 A0A060WSI6 A0A060WSI6 A0A060WY37 A0A060WY37 A0A060X4M1 A0A060X4M1 A0A060X824 A0A060X824 A0A060XAB7 A0A060XAB7 A0A060XE54 A0A060XE54 A0A060XJG6 A0A060XJG6 A0A060XN38 A0A060XN38 LSM1-2 LSM1-2 A0A060XVU7 A0A060XVU7 LSM1-3 LSM1-3 A0A060Y447 A0A060Y447 A0A060YJH5 A0A060YJH5 LSM3 LSM3 A0A060YNK5 A0A060YNK5 A0A060YR15 A0A060YR15 A0A060YSG5 A0A060YSG5 A0A060YX11 A0A060YX11 A0A060YY38 A0A060YY38 A0A060Z1D0 A0A060Z1D0 LSM4-2 LSM4-2 A0A060Z5B1 A0A060Z5B1 LSM5-2 LSM5-2 A0A060Z8V1 A0A060Z8V1 A0A060ZAN8 A0A060ZAN8 A0A060ZAZ6 A0A060ZAZ6 A0A060ZQP2 A0A060ZQP2 LSM7 LSM7 LSM7-2 LSM7-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A060VME6mRNA_decap_C domain-containing protein. (311 aa)
A0A060VSY0Uncharacterized protein. (99 aa)
A0A060VSZ8WD_REPEATS_REGION domain-containing protein. (1408 aa)
A0A060VUK6Uncharacterized protein; Belongs to the DEAD box helicase family. (456 aa)
A0A060W2M1Uncharacterized protein. (380 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (110 aa)
A0A060W9A4Uncharacterized protein; Belongs to the DEAD box helicase family. (378 aa)
A0A060WEQ7PAT1 domain-containing protein. (733 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
A0A060WM97WD_REPEATS_REGION domain-containing protein. (1218 aa)
A0A060WS68Nudix hydrolase domain-containing protein. (336 aa)
A0A060WSI6DCP2 domain-containing protein. (72 aa)
A0A060WY37Uncharacterized protein. (460 aa)
A0A060X4M1Uncharacterized protein. (173 aa)
A0A060X824PAT1 domain-containing protein. (671 aa)
A0A060XAB7Uncharacterized protein. (475 aa)
A0A060XE54Uncharacterized protein. (321 aa)
A0A060XJG6YjeF N-terminal domain-containing protein. (195 aa)
A0A060XN38Uncharacterized protein; Belongs to the DEAD box helicase family. (486 aa)
LSM1-2U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (139 aa)
A0A060XVU7YjeF N-terminal domain-containing protein. (318 aa)
LSM1-3U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
A0A060Y447Uncharacterized protein; Belongs to the DEAD box helicase family. (486 aa)
A0A060YJH5Q_MOTIF domain-containing protein. (135 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
A0A060YNK5mRNA_decap_C domain-containing protein. (549 aa)
A0A060YR15Sm domain-containing protein. (68 aa)
A0A060YSG5Uncharacterized protein. (323 aa)
A0A060YX11Uncharacterized protein. (86 aa)
A0A060YY38Sm domain-containing protein. (94 aa)
A0A060Z1D0Sm domain-containing protein. (68 aa)
LSM4-2U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A060Z5B1Uncharacterized protein. (255 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (57 aa)
A0A060Z8V1Uncharacterized protein. (257 aa)
A0A060ZAN8SH3_12 domain-containing protein. (181 aa)
A0A060ZAZ6LSM14 domain-containing protein. (166 aa)
A0A060ZQP2Helicase C-terminal domain-containing protein. (132 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (107 aa)
LSM7-2U6 snRNA-associated Sm-like protein LSm7. (111 aa)
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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