5 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060WM97	WD_REPEATS_REGION domain-containing protein. (1218 aa)
	A0A060WS68	Nudix hydrolase domain-containing protein. (336 aa)
	A0A060YNK5	mRNA_decap_C domain-containing protein. (549 aa)
	A0A060YX11	Uncharacterized protein. (86 aa)
	A0A060ZAZ6	LSM14 domain-containing protein. (166 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060WM97	A0A060WS68	WD_REPEATS_REGION domain-containing protein.	Nudix hydrolase domain-containing protein.	0.990
A0A060WM97	A0A060YNK5	WD_REPEATS_REGION domain-containing protein.	mRNA_decap_C domain-containing protein.	0.986
A0A060WM97	A0A060YX11	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.993
A0A060WM97	A0A060ZAZ6	WD_REPEATS_REGION domain-containing protein.	LSM14 domain-containing protein.	0.964
A0A060WS68	A0A060WM97	Nudix hydrolase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.990
A0A060WS68	A0A060YNK5	Nudix hydrolase domain-containing protein.	mRNA_decap_C domain-containing protein.	0.988
A0A060WS68	A0A060YX11	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.990
A0A060WS68	A0A060ZAZ6	Nudix hydrolase domain-containing protein.	LSM14 domain-containing protein.	0.983
A0A060YNK5	A0A060WM97	mRNA_decap_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.986
A0A060YNK5	A0A060WS68	mRNA_decap_C domain-containing protein.	Nudix hydrolase domain-containing protein.	0.988
A0A060YNK5	A0A060YX11	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.983
A0A060YNK5	A0A060ZAZ6	mRNA_decap_C domain-containing protein.	LSM14 domain-containing protein.	0.959
A0A060YX11	A0A060WM97	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
A0A060YX11	A0A060WS68	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.990
A0A060YX11	A0A060YNK5	Uncharacterized protein.	mRNA_decap_C domain-containing protein.	0.983
A0A060YX11	A0A060ZAZ6	Uncharacterized protein.	LSM14 domain-containing protein.	0.992
A0A060ZAZ6	A0A060WM97	LSM14 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.964
A0A060ZAZ6	A0A060WS68	LSM14 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.983
A0A060ZAZ6	A0A060YNK5	LSM14 domain-containing protein.	mRNA_decap_C domain-containing protein.	0.959
A0A060ZAZ6	A0A060YX11	LSM14 domain-containing protein.	Uncharacterized protein.	0.992