(46 nodes) Mixed, incl. Yip1 domain, and Integral component of Golgi membrane network (Oncorhynchus mykiss)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060VUX4	Uncharacterized protein. (988 aa)
	A0A060VVL7	Uncharacterized protein. (976 aa)
	A0A060VYC2	Protein YIPF. (249 aa)
	A0A060VYC6	Uncharacterized protein. (206 aa)
	A0A060VYD8	Uncharacterized protein. (343 aa)
	A0A060VYH4	Uncharacterized protein. (142 aa)
	A0A060VZI4	PRA1 family protein. (192 aa)
	A0A060W615	Uncharacterized protein. (948 aa)
	A0A060W724	Uncharacterized protein. (301 aa)
	A0A060W7D7	Uncharacterized protein. (209 aa)
	A0A060WM60	Uncharacterized protein. (305 aa)
	A0A060WP56	Protein YIPF. (256 aa)
	A0A060WP85	ABA_GPCR domain-containing protein. (178 aa)
	A0A060WRP9	Uncharacterized protein. (196 aa)
	A0A060WV07	Uncharacterized protein. (82 aa)
	A0A060WYS5	Uncharacterized protein. (89 aa)
	A0A060X0W4	Uncharacterized protein. (175 aa)
	A0A060X431	Uncharacterized protein. (368 aa)
	A0A060X8A5	Uncharacterized protein. (150 aa)
	A0A060XCA9	Uncharacterized protein. (309 aa)
	A0A060XCE5	RIC3 domain-containing protein. (503 aa)
	A0A060XCU1	Protein YIPF. (259 aa)
	A0A060XD52	Protein YIPF. (301 aa)
	A0A060XDT3	Uncharacterized protein. (103 aa)
	A0A060XIV6	Uncharacterized protein. (141 aa)
	A0A060XKG2	Uncharacterized protein. (119 aa)
	A0A060XN86	Uncharacterized protein. (345 aa)
	A0A060XQF1	Protein tweety homolog; Probable chloride channel. (255 aa)
	A0A060XR09	Protein tweety homolog; Probable chloride channel. (182 aa)
	A0A060XTJ4	PRA1 family protein. (203 aa)
	A0A060XUK1	Uncharacterized protein. (297 aa)
	A0A060XW11	B30.2/SPRY domain-containing protein. (224 aa)
	A0A060Y0M4	Uncharacterized protein. (144 aa)
	A0A060Y4Z8	Protein YIPF. (301 aa)
	A0A060Y5T3	Uncharacterized protein. (135 aa)
	A0A060Y9H3	GPHR_N domain-containing protein. (387 aa)
	A0A060YBE6	Uncharacterized protein. (106 aa)
	A0A060YJH2	Protein YIPF. (246 aa)
	A0A060YLE6	Protein YIPF. (360 aa)
	A0A060YLS8	Uncharacterized protein. (420 aa)
	A0A060YRN0	Uncharacterized protein. (312 aa)
	A0A060YRN3	Golgi apparatus membrane protein TVP23 homolog. (202 aa)
	A0A061A7B0	G_PROTEIN_RECEP_F1_2 domain-containing protein. (301 aa)
	YEE9	Uncharacterized protein YEE9. (82 aa)
	FA18B	Golgi apparatus membrane protein TVP23 homolog. (201 aa)
	W5S0F1_ONCMY	Protein YIPF. (237 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A060VYC2	A0A060VYD8	A0A060VYC2	A0A060VYD8	Protein YIPF.	Uncharacterized protein.	0.821
A0A060VYC2	A0A060VZI4	A0A060VYC2	A0A060VZI4	Protein YIPF.	PRA1 family protein.	0.758
A0A060VYC2	A0A060W724	A0A060VYC2	A0A060W724	Protein YIPF.	Uncharacterized protein.	0.841
A0A060VYC2	A0A060WM60	A0A060VYC2	A0A060WM60	Protein YIPF.	Uncharacterized protein.	0.841
A0A060VYC2	A0A060WV07	A0A060VYC2	A0A060WV07	Protein YIPF.	Uncharacterized protein.	0.693
A0A060VYC2	A0A060WYS5	A0A060VYC2	A0A060WYS5	Protein YIPF.	Uncharacterized protein.	0.841
A0A060VYC2	A0A060XCA9	A0A060VYC2	A0A060XCA9	Protein YIPF.	Uncharacterized protein.	0.841
A0A060VYC2	A0A060XD52	A0A060VYC2	A0A060XD52	Protein YIPF.	Protein YIPF.	0.810
A0A060VYC2	A0A060XN86	A0A060VYC2	A0A060XN86	Protein YIPF.	Uncharacterized protein.	0.821
A0A060VYC2	A0A060XTJ4	A0A060VYC2	A0A060XTJ4	Protein YIPF.	PRA1 family protein.	0.758
A0A060VYC2	A0A060Y4Z8	A0A060VYC2	A0A060Y4Z8	Protein YIPF.	Protein YIPF.	0.810
A0A060VYC2	A0A060YBE6	A0A060VYC2	A0A060YBE6	Protein YIPF.	Uncharacterized protein.	0.841
A0A060VYC2	A0A060YLE6	A0A060VYC2	A0A060YLE6	Protein YIPF.	Protein YIPF.	0.810
A0A060VYC2	YEE9	A0A060VYC2	C1BEK3	Protein YIPF.	Uncharacterized protein YEE9.	0.693
A0A060VYC6	A0A060YJH2	A0A060VYC6	A0A060YJH2	Uncharacterized protein.	Protein YIPF.	0.451
A0A060VYC6	W5S0F1_ONCMY	A0A060VYC6	W5S0F1	Uncharacterized protein.	Protein YIPF.	0.451
A0A060VYD8	A0A060VYC2	A0A060VYD8	A0A060VYC2	Uncharacterized protein.	Protein YIPF.	0.821
A0A060VYD8	A0A060WP56	A0A060VYD8	A0A060WP56	Uncharacterized protein.	Protein YIPF.	0.821
A0A060VYD8	A0A060WYS5	A0A060VYD8	A0A060WYS5	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A060VYD8	A0A060XCA9	A0A060VYD8	A0A060XCA9	Uncharacterized protein.	Uncharacterized protein.	0.451