48 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060VZ23	WW domain-containing protein. (228 aa)
	A0A060VZG7	Uncharacterized protein. (323 aa)
	A0A060WBI7	Uncharacterized protein. (531 aa)
	A0A060WDA2	Mab-21 domain-containing protein. (394 aa)
	A0A060WFF8	RING-type domain-containing protein. (231 aa)
	A0A060WGK6	SEFIR domain-containing protein. (199 aa)
	A0A060WGW4	Uncharacterized protein. (1392 aa)
	A0A060WHB3	RWD domain-containing protein. (263 aa)
	A0A060WIG0	B box-type domain-containing protein. (290 aa)
	A0A060WIJ9	SEFIR domain-containing protein. (408 aa)
	A0A060WLS6	RING-type domain-containing protein. (283 aa)
	A0A060WPU9	WW domain-containing protein. (211 aa)
	A0A060WVW1	Uncharacterized protein. (195 aa)
	A0A060WWF6	Uncharacterized protein. (571 aa)
	A0A060X1X1	HGTP_anticodon2 domain-containing protein. (242 aa)
	A0A060X383	Uncharacterized protein. (48 aa)
	A0A060X4G8	RING-type domain-containing protein. (832 aa)
	A0A060X760	BZIP domain-containing protein. (501 aa)
	A0A060XFE5	B box-type domain-containing protein. (719 aa)
	A0A060XJT9	RING-type domain-containing protein. (844 aa)
	A0A060XQ40	Uncharacterized protein. (1366 aa)
	A0A060XQB8	CARD domain-containing protein. (116 aa)
	A0A060XQK7	C3H1-type domain-containing protein. (582 aa)
	A0A060XVL7	SEFIR domain-containing protein. (195 aa)
	A0A060XZS9	C3H1-type domain-containing protein. (653 aa)
	A0A060YBC1	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (413 aa)
	A0A060YCF8	RLR CTR domain-containing protein. (69 aa)
	A0A060YFM4	Uncharacterized protein. (416 aa)
	A0A060YJ69	RING-type domain-containing protein. (470 aa)
	A0A060YKI6	Uncharacterized protein. (215 aa)
	A0A060YLP9	Uncharacterized protein. (405 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (351 aa)
	A0A060YLV7	BZIP domain-containing protein. (559 aa)
	A0A060YSR8	IL12p40_C domain-containing protein. (170 aa)
	A0A060YSX0	CARD domain-containing protein. (182 aa)
	A0A060YT45	Ig-like domain-containing protein. (127 aa)
	A0A060YTF9	Uncharacterized protein. (122 aa)
	A0A060Z041	DTC domain-containing protein. (163 aa)
	A0A060Z652	DTC domain-containing protein. (112 aa)
	A0A060Z663	Uncharacterized protein. (142 aa)
	A0A060Z9Y6	Uncharacterized protein. (120 aa)
	A0A060ZAH7	Uncharacterized protein. (115 aa)
	A0A060ZGC5	RING-type domain-containing protein. (281 aa)
	A0A060ZGX8	TPR_REGION domain-containing protein. (185 aa)
	A0A060ZIZ8	TPR_REGION domain-containing protein. (140 aa)
	ASC	Apoptosis-associated speck-like protein containing a CARD. (99 aa)
	A0A060VX73	C3H1-type domain-containing protein. (621 aa)
	A0A060VU63	C3H1-type domain-containing protein. (548 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A060VZ23	A0A060WDA2	A0A060VZ23	A0A060WDA2	WW domain-containing protein.	Mab-21 domain-containing protein.	0.465
A0A060VZG7	A0A060WBI7	A0A060VZG7	A0A060WBI7	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A060VZG7	A0A060WGK6	A0A060VZG7	A0A060WGK6	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060VZG7	A0A060WIJ9	A0A060VZG7	A0A060WIJ9	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060VZG7	A0A060XVL7	A0A060VZG7	A0A060XVL7	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060VZG7	A0A060YKI6	A0A060VZG7	A0A060YKI6	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A060VZG7	A0A060Z9Y6	A0A060VZG7	A0A060Z9Y6	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A060VZG7	IL12B	A0A060VZG7	A0A060YLS5	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.992
A0A060WBI7	A0A060VZG7	A0A060WBI7	A0A060VZG7	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A060WBI7	A0A060WGK6	A0A060WBI7	A0A060WGK6	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060WBI7	A0A060WIJ9	A0A060WBI7	A0A060WIJ9	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060WBI7	A0A060XVL7	A0A060WBI7	A0A060XVL7	Uncharacterized protein.	SEFIR domain-containing protein.	0.458
A0A060WBI7	A0A060YKI6	A0A060WBI7	A0A060YKI6	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A060WBI7	A0A060Z9Y6	A0A060WBI7	A0A060Z9Y6	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A060WBI7	IL12B	A0A060WBI7	A0A060YLS5	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.992
A0A060WDA2	A0A060VZ23	A0A060WDA2	A0A060VZ23	Mab-21 domain-containing protein.	WW domain-containing protein.	0.465
A0A060WDA2	A0A060WPU9	A0A060WDA2	A0A060WPU9	Mab-21 domain-containing protein.	WW domain-containing protein.	0.465
A0A060WDA2	A0A060YCF8	A0A060WDA2	A0A060YCF8	Mab-21 domain-containing protein.	RLR CTR domain-containing protein.	0.508
A0A060WDA2	A0A060YFM4	A0A060WDA2	A0A060YFM4	Mab-21 domain-containing protein.	Uncharacterized protein.	0.932
A0A060WDA2	A0A060YLP9	A0A060WDA2	A0A060YLP9	Mab-21 domain-containing protein.	Uncharacterized protein.	0.932