11 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060WVA8	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (965 aa)
	A0A060WS68	Nudix hydrolase domain-containing protein. (336 aa)
	A0A060W1Z3	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (955 aa)
	A0A060VWH4	Uncharacterized protein. (690 aa)
	A0A060YQW7	Uncharacterized protein. (1494 aa)
	A0A060YSG5	Uncharacterized protein. (323 aa)
	A0A060Z5B1	Uncharacterized protein. (255 aa)
	A0A060Z8V1	Uncharacterized protein. (257 aa)
	A0A060ZAN8	SH3_12 domain-containing protein. (181 aa)
	A0A060WSI6	DCP2 domain-containing protein. (72 aa)
	A0A060YA14	Uncharacterized protein. (444 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VWH4	A0A060W1Z3	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.581
A0A060VWH4	A0A060WVA8	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.581
A0A060W1Z3	A0A060VWH4	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.581
A0A060W1Z3	A0A060WS68	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Nudix hydrolase domain-containing protein.	0.505
A0A060W1Z3	A0A060WSI6	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	DCP2 domain-containing protein.	0.505
A0A060W1Z3	A0A060YA14	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.964
A0A060W1Z3	A0A060YQW7	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.966
A0A060W1Z3	A0A060YSG5	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.962
A0A060W1Z3	A0A060Z5B1	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.962
A0A060W1Z3	A0A060Z8V1	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Uncharacterized protein.	0.962
A0A060W1Z3	A0A060ZAN8	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	SH3_12 domain-containing protein.	0.962
A0A060WS68	A0A060W1Z3	Nudix hydrolase domain-containing protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.505
A0A060WS68	A0A060WVA8	Nudix hydrolase domain-containing protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.505
A0A060WS68	A0A060YA14	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.956
A0A060WS68	A0A060YQW7	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.956
A0A060WS68	A0A060YSG5	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.956
A0A060WS68	A0A060Z5B1	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.956
A0A060WS68	A0A060Z8V1	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.956
A0A060WS68	A0A060ZAN8	Nudix hydrolase domain-containing protein.	SH3_12 domain-containing protein.	0.956
A0A060WSI6	A0A060W1Z3	DCP2 domain-containing protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.505