25 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060W2T8	Uncharacterized protein. (490 aa)
	A0A060W312	Uncharacterized protein. (1845 aa)
	A0A060W3A1	Ras-GEF domain-containing protein. (996 aa)
	A0A060W3H7	Uncharacterized protein. (343 aa)
	GDF11	Growth differentiation factor 11. (270 aa)
	A0A060WTK4	Uncharacterized protein. (572 aa)
	A0A060X462	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1096 aa)
	A0A060X9Q4	Serine/threonine-protein kinase TOR. (1444 aa)
	A0A060X9S5	Uncharacterized protein. (166 aa)
	A0A060XK61	C2 domain-containing protein. (266 aa)
	A0A060XPL2	Uncharacterized protein. (56 aa)
	A0A060XQ48	SH3 domain-containing protein. (379 aa)
	A0A060XRW4	Ras-GEF domain-containing protein. (1260 aa)
	A0A060XSH4	Uncharacterized protein. (189 aa)
	A0A060XSR6	Uncharacterized protein. (126 aa)
	A0A060XUL1	Uncharacterized protein. (186 aa)
	A0A060XW98	FERM domain-containing protein. (757 aa)
	A0A060Y8C8	Uncharacterized protein. (82 aa)
	A0A060YB96	Uncharacterized protein. (177 aa)
	A0A060YP35	Phosphoinositide phospholipase C. (765 aa)
	A0A060YQ03	Phosphoinositide phospholipase C. (228 aa)
	A0A060Z0W3	Uncharacterized protein. (85 aa)
	A0A060ZFJ3	Uncharacterized protein. (212 aa)
	A0A060ZHH4	Uncharacterized protein. (160 aa)
	C8BMC2_ONCMY	Akirin 1(2b). (187 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060W2T8	A0A060X462	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.599
A0A060W2T8	A0A060X9Q4	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.599
A0A060W2T8	A0A060Y8C8	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A060W2T8	A0A060ZHH4	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A060W312	A0A060X462	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.599
A0A060W312	A0A060X9Q4	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.599
A0A060W312	A0A060XK61	Uncharacterized protein.	C2 domain-containing protein.	0.831
A0A060W312	A0A060XRW4	Uncharacterized protein.	Ras-GEF domain-containing protein.	0.837
A0A060W312	A0A060XSH4	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A060W312	A0A060Y8C8	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A060W312	A0A060YP35	Uncharacterized protein.	Phosphoinositide phospholipase C.	0.833
A0A060W312	A0A060YQ03	Uncharacterized protein.	Phosphoinositide phospholipase C.	0.830
A0A060W312	A0A060ZHH4	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A060W3A1	A0A060X462	Ras-GEF domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.599
A0A060W3A1	A0A060X9Q4	Ras-GEF domain-containing protein.	Serine/threonine-protein kinase TOR.	0.599
A0A060W3A1	A0A060Y8C8	Ras-GEF domain-containing protein.	Uncharacterized protein.	0.599
A0A060W3A1	A0A060ZHH4	Ras-GEF domain-containing protein.	Uncharacterized protein.	0.599
A0A060W3H7	A0A060X462	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.599
A0A060W3H7	A0A060X9Q4	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.599
A0A060W3H7	A0A060Y8C8	Uncharacterized protein.	Uncharacterized protein.	0.599