STRINGSTRING
A0A060VTQ6 A0A060VTQ6 A0A060VWQ6 A0A060VWQ6 A0A060W191 A0A060W191 LSM4 LSM4 A0A060W8C2 A0A060W8C2 A0A060WD91 A0A060WD91 A0A060WEL7 A0A060WEL7 A0A060WG58 A0A060WG58 A0A060WII1 A0A060WII1 LSM5 LSM5 A0A060WL12 A0A060WL12 A0A060WMF5 A0A060WMF5 A0A060X4G3 A0A060X4G3 A0A060X6R4 A0A060X6R4 A0A060XC58 A0A060XC58 A0A060XCQ8 A0A060XCQ8 A0A060XDA8 A0A060XDA8 A0A060XE54 A0A060XE54 A0A060XGB8 A0A060XGB8 A0A060XGC8 A0A060XGC8 A0A060XHA7 A0A060XHA7 A0A060XI99 A0A060XI99 A0A060XIJ6 A0A060XIJ6 A0A060XMR2 A0A060XMR2 A0A060XZM9 A0A060XZM9 A0A060XZY4 A0A060XZY4 A0A060Y042 A0A060Y042 A0A060Y1P7 A0A060Y1P7 A0A060Y210 A0A060Y210 A0A060Y369 A0A060Y369 A0A060Y410 A0A060Y410 A0A060Y7F4 A0A060Y7F4 A0A060Y7J4 A0A060Y7J4 A0A060Y7S1 A0A060Y7S1 A0A060Y8T8 A0A060Y8T8 A0A060YA01 A0A060YA01 A0A060YJA3 A0A060YJA3 A0A060YKD5 A0A060YKD5 A0A060YLT0 A0A060YLT0 LSM3 LSM3 A0A060YR15 A0A060YR15 A0A060YT29 A0A060YT29 A0A060YY38 A0A060YY38 A0A060Z1D0 A0A060Z1D0 LSM4-2 LSM4-2 A0A060Z4V8 A0A060Z4V8 LSM5-2 LSM5-2 A0A060ZBC5 A0A060ZBC5 A0A060ZEE8 A0A060ZEE8 A0A060ZEV5 A0A060ZEV5 A0A060ZF79 A0A060ZF79 TXN4A TXN4A SMD3 SMD3 LSM7 LSM7 SMD2 SMD2 LSM7-2 LSM7-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A060VTQ6Uncharacterized protein. (2137 aa)
A0A060VWQ6Uncharacterized protein. (2137 aa)
A0A060W191WD_REPEATS_REGION domain-containing protein. (506 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (110 aa)
A0A060W8C2Uncharacterized protein. (774 aa)
A0A060WD91Tr-type G domain-containing protein. (970 aa)
A0A060WEL7Uncharacterized protein. (802 aa)
A0A060WG58Uncharacterized protein. (311 aa)
A0A060WII1Small nuclear ribonucleoprotein Sm D3. (127 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
A0A060WL12Small nuclear ribonucleoprotein Sm D3. (183 aa)
A0A060WMF5USP domain-containing protein. (208 aa)
A0A060X4G3Small nuclear ribonucleoprotein-associated protein. (229 aa)
A0A060X6R4Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (137 aa)
A0A060XC58Uncharacterized protein. (494 aa)
A0A060XCQ8WD_REPEATS_REGION domain-containing protein. (126 aa)
A0A060XDA8Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
A0A060XE54Uncharacterized protein. (321 aa)
A0A060XGB8Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
A0A060XGC8Small nuclear ribonucleoprotein Sm D2. (165 aa)
A0A060XHA7MPN domain-containing protein. (2359 aa)
A0A060XI99Tr-type G domain-containing protein. (970 aa)
A0A060XIJ6U1-type domain-containing protein. (222 aa)
A0A060XMR2Uncharacterized protein. (814 aa)
A0A060XZM9Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
A0A060XZY4MPN domain-containing protein. (2338 aa)
A0A060Y042Prp18 domain-containing protein. (211 aa)
A0A060Y1P7WD_REPEATS_REGION domain-containing protein. (206 aa)
A0A060Y210Uncharacterized protein. (220 aa)
A0A060Y369PWI domain-containing protein. (230 aa)
A0A060Y410Uncharacterized protein. (756 aa)
A0A060Y7F4Uncharacterized protein. (62 aa)
A0A060Y7J4Sm domain-containing protein. (61 aa)
A0A060Y7S1PWI domain-containing protein. (380 aa)
A0A060Y8T8Uncharacterized protein. (45 aa)
A0A060YA01Prp31_C domain-containing protein. (228 aa)
A0A060YJA3Sm domain-containing protein. (105 aa)
A0A060YKD5WD_REPEATS_REGION domain-containing protein. (348 aa)
A0A060YLT0Sm domain-containing protein. (138 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
A0A060YR15Sm domain-containing protein. (68 aa)
A0A060YT29Sm domain-containing protein. (121 aa)
A0A060YY38Sm domain-containing protein. (94 aa)
A0A060Z1D0Sm domain-containing protein. (68 aa)
LSM4-2U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A060Z4V8Uncharacterized protein. (160 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (57 aa)
A0A060ZBC5PRP1_N domain-containing protein. (229 aa)
A0A060ZEE8SFM domain-containing protein. (176 aa)
A0A060ZEV5Uncharacterized protein. (47 aa)
A0A060ZF79Uncharacterized protein. (85 aa)
TXN4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SMD3Small nuclear ribonucleoprotein Sm D3. (128 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (107 aa)
SMD2Small nuclear ribonucleoprotein Sm D2. (111 aa)
LSM7-2U6 snRNA-associated Sm-like protein LSm7. (111 aa)
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.