(66 nodes) Cardiac muscle cell development network (Oncorhynchus mykiss)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060XT49	ANK_REP_REGION domain-containing protein. (684 aa)
	A0A060X0H5	Ig-like domain-containing protein. (621 aa)
	A0A060X1T3	Uncharacterized protein. (1012 aa)
	A0A060X462	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1096 aa)
	A0A060X5V3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (454 aa)
	A0A060X885	Uncharacterized protein. (179 aa)
	A0A060X9Q4	Serine/threonine-protein kinase TOR. (1444 aa)
	A0A060XAQ0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (414 aa)
	A0A060XBA0	MADS-box domain-containing protein. (597 aa)
	A0A060XBJ4	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	A0A060XCI0	MamL-1 domain-containing protein. (964 aa)
	A0A060XLB3	Uncharacterized protein; Belongs to the cytochrome P450 family. (526 aa)
	A0A060XLF7	Uncharacterized protein. (517 aa)
	A0A060XP82	Uncharacterized protein. (3368 aa)
	A0A060XPV0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (426 aa)
	A0A060XT36	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (119 aa)
	A0A060XTR3	Uncharacterized protein. (175 aa)
	A0A060XU60	Uncharacterized protein. (235 aa)
	A0A060XWH1	Uncharacterized protein. (1828 aa)
	A0A060XXI9	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	A0A060XZW1	Uncharacterized protein. (2097 aa)
	A0A060Y0F8	Uncharacterized protein. (179 aa)
	A0A060Y2V6	Uncharacterized protein. (410 aa)
	A0A060Y4Q1	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	A0A060Y6J5	Uncharacterized protein. (1004 aa)
	A0A060Y761	Uncharacterized protein. (1419 aa)
	A0A060Y8C8	Uncharacterized protein. (82 aa)
	A0A060YA96	Uncharacterized protein. (507 aa)
	A0A060YAF4	Uncharacterized protein. (1163 aa)
	A0A060YCG9	Uncharacterized protein. (1675 aa)
	A0A060YDU5	Homeobox domain-containing protein. (314 aa)
	A0A060YG59	Uncharacterized protein. (165 aa)
	A0A060YGS2	TGF_BETA_2 domain-containing protein. (414 aa)
	A0A060YHU9	Uncharacterized protein. (412 aa)
	A0A060YNL0	MADS-box domain-containing protein. (391 aa)
	A0A060YRJ6	Homeobox domain-containing protein. (315 aa)
	A0A060YZL4	Protein kinase domain-containing protein. (271 aa)
	A0A060Z0M8	Uncharacterized protein. (409 aa)
	A0A060Z1A5	Uncharacterized protein; Belongs to the cytochrome P450 family. (464 aa)
	A0A060Z1W8	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (199 aa)
	A0A060Z203	Uncharacterized protein. (572 aa)
	A0A060Z9I9	Uncharacterized protein. (191 aa)
	A0A060ZFG2	Uncharacterized protein. (251 aa)
	A0A060ZHH4	Uncharacterized protein. (160 aa)
	A0A060VM63	Protein kinase domain-containing protein. (678 aa)
	A0A060VMZ8	Uncharacterized protein. (600 aa)
	A0A060VT14	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (464 aa)
	A0A060VU94	Uncharacterized protein. (193 aa)
	A0A060VV31	Uncharacterized protein. (224 aa)
	A0A060VVD0	LIM zinc-binding domain-containing protein. (358 aa)
	A0A060VX69	MADS-box domain-containing protein. (293 aa)
	A0A060VZ20	Uncharacterized protein. (199 aa)
	A0A060W0S8	Uncharacterized protein. (1263 aa)
	A0A060W1Y8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (388 aa)
	A0A060W429	MamL-1 domain-containing protein. (1052 aa)
	A0A060W9T8	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (150 aa)
	A0A060WEM5	Uncharacterized protein. (283 aa)
	A0A060WIA4	Uncharacterized protein. (672 aa)
	A0A060WK14	Uncharacterized protein. (1836 aa)
	A0A060WPP1	ANK_REP_REGION domain-containing protein. (367 aa)
	A0A060WQZ2	Uncharacterized protein. (306 aa)
	A0A060WR94	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (729 aa)
	A0A060WS88	Uncharacterized protein. (251 aa)
	A0A060WT19	MADS-box domain-containing protein. (534 aa)
	A0A060WXD6	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (460 aa)
	A0A060WYI8	Uncharacterized protein. (808 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VT14	A0A060WR94	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.538
A0A060VT14	A0A060WS88	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Uncharacterized protein.	0.538
A0A060VT14	A0A060XT36	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.538
A0A060VT14	A0A060XU60	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Uncharacterized protein.	0.538
A0A060VT14	A0A060Y2V6	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Uncharacterized protein.	0.538
A0A060VT14	A0A060Z1W8	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.538
A0A060VU94	A0A060VV31	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A060VU94	A0A060VVD0	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.807
A0A060VU94	A0A060W0S8	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A060VU94	A0A060W9T8	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.456
A0A060VU94	A0A060X885	Uncharacterized protein.	Uncharacterized protein.	0.616
A0A060VU94	A0A060XBJ4	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.456
A0A060VU94	A0A060XP82	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A060VU94	A0A060XWH1	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A060VU94	A0A060XZW1	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A060VU94	A0A060Y0F8	Uncharacterized protein.	Uncharacterized protein.	0.616
A0A060VV31	A0A060VU94	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A060VV31	A0A060VVD0	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.478
A0A060VV31	A0A060X885	Uncharacterized protein.	Uncharacterized protein.	0.572
A0A060VV31	A0A060Y0F8	Uncharacterized protein.	Uncharacterized protein.	0.572