34 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060Z9D0	Uncharacterized protein. (444 aa)
	A0A060VM37	Uncharacterized protein. (204 aa)
	A0A060VN15	CARD domain-containing protein. (190 aa)
	A0A060VSK2	Uncharacterized protein. (195 aa)
	A0A060VTJ4	Protein kinase domain-containing protein. (250 aa)
	A0A060VY01	Uncharacterized protein. (204 aa)
	A0A060VYN9	Uncharacterized protein. (189 aa)
	A0A060W8I1	TPR_REGION domain-containing protein. (609 aa)
	A0A060WDF6	TPR_REGION domain-containing protein. (574 aa)
	A0A060WKR6	Asp-B-Hydro_N domain-containing protein. (133 aa)
	A0A060WND2	Asp-B-Hydro_N domain-containing protein. (321 aa)
	A0A060WPC3	Uncharacterized protein. (589 aa)
	A0A060WUK5	Asp-B-Hydro_N domain-containing protein. (124 aa)
	A0A060WV11	Uncharacterized protein. (271 aa)
	A0A060X063	Uncharacterized protein; Belongs to the peptidase C14A family. (328 aa)
	A0A060X0M2	Uncharacterized protein. (155 aa)
	A0A060X3D3	Uncharacterized protein; Belongs to the peptidase C14A family. (583 aa)
	A0A060X986	Uncharacterized protein; Belongs to the peptidase C14A family. (455 aa)
	A0A060XJ79	Uncharacterized protein. (270 aa)
	A0A060XKC3	Uncharacterized protein. (109 aa)
	A0A060XKG4	Uncharacterized protein; Belongs to the peptidase C14A family. (437 aa)
	A0A060XLZ6	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family. (75 aa)
	A0A060XMN7	Uncharacterized protein; Belongs to the peptidase C14A family. (407 aa)
	A0A060XQU7	Uncharacterized protein. (178 aa)
	A0A060XSP1	Protein kinase domain-containing protein. (305 aa)
	A0A060XUA7	Uncharacterized protein; Belongs to the peptidase C14A family. (291 aa)
	A0A060Y3H9	Uncharacterized protein. (124 aa)
	A0A060Y4G4	Uncharacterized protein. (344 aa)
	A0A060YA72	Uncharacterized protein. (192 aa)
	A0A060YHN1	Uncharacterized protein; Belongs to the peptidase C14A family. (417 aa)
	A0A060YIE2	Uncharacterized protein. (172 aa)
	ASC	Apoptosis-associated speck-like protein containing a CARD. (99 aa)
	A0A060Z319	Uncharacterized protein. (278 aa)
	A0A060Z711	Uncharacterized protein. (82 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A060VM37	A0A060X063	A0A060VM37	A0A060X063	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.629
A0A060VM37	A0A060X3D3	A0A060VM37	A0A060X3D3	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.641
A0A060VM37	A0A060X986	A0A060VM37	A0A060X986	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.629
A0A060VM37	A0A060XKG4	A0A060VM37	A0A060XKG4	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.698
A0A060VM37	A0A060XLZ6	A0A060VM37	A0A060XLZ6	Uncharacterized protein.	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family.	0.528
A0A060VM37	A0A060XMN7	A0A060VM37	A0A060XMN7	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.528
A0A060VM37	A0A060XUA7	A0A060VM37	A0A060XUA7	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.700
A0A060VM37	A0A060YA72	A0A060VM37	A0A060YA72	Uncharacterized protein.	Uncharacterized protein.	0.647
A0A060VM37	A0A060YHN1	A0A060VM37	A0A060YHN1	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.647
A0A060VM37	A0A060YIE2	A0A060VM37	A0A060YIE2	Uncharacterized protein.	Uncharacterized protein.	0.887
A0A060VM37	ASC	A0A060VM37	C1BEY3	Uncharacterized protein.	Apoptosis-associated speck-like protein containing a CARD.	0.515
A0A060VN15	A0A060VSK2	A0A060VN15	A0A060VSK2	CARD domain-containing protein.	Uncharacterized protein.	0.826
A0A060VN15	A0A060VYN9	A0A060VN15	A0A060VYN9	CARD domain-containing protein.	Uncharacterized protein.	0.826
A0A060VN15	A0A060X063	A0A060VN15	A0A060X063	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.588
A0A060VN15	A0A060X3D3	A0A060VN15	A0A060X3D3	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.685
A0A060VN15	A0A060X986	A0A060VN15	A0A060X986	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.588
A0A060VN15	A0A060XKG4	A0A060VN15	A0A060XKG4	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.678
A0A060VN15	A0A060XLZ6	A0A060VN15	A0A060XLZ6	CARD domain-containing protein.	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family.	0.685
A0A060VN15	A0A060XMN7	A0A060VN15	A0A060XMN7	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.685
A0A060VN15	A0A060XUA7	A0A060VN15	A0A060XUA7	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.678