51 items (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060YT48	RWD domain-containing protein. (225 aa)
	A0A060VUS2	DNA_mis_repair domain-containing protein. (725 aa)
	A0A060VW47	HATPase_c domain-containing protein. (724 aa)
	A0A060VWY9	Tr-type G domain-containing protein. (909 aa)
	A0A060VXW7	Uncharacterized protein. (291 aa)
	A0A060W0C6	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1559 aa)
	A0A060W270	Uncharacterized protein. (245 aa)
	A0A060W3W8	HATPase_c domain-containing protein. (718 aa)
	A0A060W5Y1	HATPase_c domain-containing protein. (735 aa)
	A0A060WD91	Tr-type G domain-containing protein. (970 aa)
	A0A060WH70	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (398 aa)
	A0A060WLN4	Uncharacterized protein. (1171 aa)
	A0A060WMV8	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (387 aa)
	A0A060XR67	Uncharacterized protein. (73 aa)
	A0A060XPW0	HATPase_c domain-containing protein. (725 aa)
	A0A060XPG0	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (402 aa)
	A0A060XMQ9	HATPase_c domain-containing protein. (818 aa)
	A0A060XM80	S1 motif domain-containing protein. (803 aa)
	A0A060XII7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (156 aa)
	A0A060XI99	Tr-type G domain-containing protein. (970 aa)
	A0A060XFW6	HATPase_c domain-containing protein. (773 aa)
	A0A060XE58	Uncharacterized protein. (245 aa)
	A0A060XC61	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (400 aa)
	A0A060X6U2	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (553 aa)
	A0A060X5V9	Uncharacterized protein. (736 aa)
	LONP2	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (898 aa)
	A0A060X272	RNase_PH domain-containing protein. (277 aa)
	A0A060WZX5	Uncharacterized protein. (861 aa)
	A0A060WZG3	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (877 aa)
	A0A060WYM7	Tr-type G domain-containing protein. (837 aa)
	A0A060WTG2	S1 motif domain-containing protein. (770 aa)
	A0A060WT77	Uncharacterized protein. (452 aa)
	A0A060WP17	Uncharacterized protein. (542 aa)
	A0A060YL79	Uncharacterized protein. (1379 aa)
	A0A060Z227	GalKase_gal_bdg domain-containing protein. (127 aa)
	A0A060ZH78	RNase_PH domain-containing protein. (179 aa)
	A0A061ADY1	RNase_PH domain-containing protein. (164 aa)
	RS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	GFM2	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (776 aa)
	A0A060VSA8	HMG box domain-containing protein. (568 aa)
	A0A060YH25	Uncharacterized protein. (193 aa)
	A0A060YIG9	EFG_C domain-containing protein. (162 aa)
	A0A060YK55	RNase_PH domain-containing protein. (581 aa)
	A0A060Y7M2	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (402 aa)
	A0A060Y577	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (282 aa)
	A0A060Y4G5	HATPase_c domain-containing protein. (789 aa)
	A0A060Y2V3	Uncharacterized protein. (378 aa)
	LONP1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1014 aa)
	A0A060XX32	HATPase_c domain-containing protein. (735 aa)
	A0A060XSZ2	Tr-type G domain-containing protein. (919 aa)
	A0A060XSW2	Tr-type G domain-containing protein. (864 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A060VSA8	A0A060VUS2	A0A060VSA8	A0A060VUS2	HMG box domain-containing protein.	DNA_mis_repair domain-containing protein.	0.996
A0A060VSA8	A0A060WLN4	A0A060VSA8	A0A060WLN4	HMG box domain-containing protein.	Uncharacterized protein.	0.765
A0A060VSA8	A0A060WZX5	A0A060VSA8	A0A060WZX5	HMG box domain-containing protein.	Uncharacterized protein.	0.791
A0A060VSA8	A0A060YT48	A0A060VSA8	A0A060YT48	HMG box domain-containing protein.	RWD domain-containing protein.	0.436
A0A060VSA8	GFM2	A0A060VSA8	A0A060VRH1	HMG box domain-containing protein.	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.472
A0A060VUS2	A0A060VSA8	A0A060VUS2	A0A060VSA8	DNA_mis_repair domain-containing protein.	HMG box domain-containing protein.	0.996
A0A060VUS2	A0A060W0C6	A0A060VUS2	A0A060W0C6	DNA_mis_repair domain-containing protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.469
A0A060VUS2	A0A060WLN4	A0A060VUS2	A0A060WLN4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.999
A0A060VUS2	A0A060WZG3	A0A060VUS2	A0A060WZG3	DNA_mis_repair domain-containing protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.469
A0A060VUS2	A0A060WZX5	A0A060VUS2	A0A060WZX5	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.999
A0A060VUS2	A0A060X6U2	A0A060VUS2	A0A060X6U2	DNA_mis_repair domain-containing protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.469
A0A060VUS2	A0A060YT48	A0A060VUS2	A0A060YT48	DNA_mis_repair domain-containing protein.	RWD domain-containing protein.	0.471
A0A060VUS2	GFM2	A0A060VUS2	A0A060VRH1	DNA_mis_repair domain-containing protein.	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.460
A0A060VW47	A0A060VWY9	A0A060VW47	A0A060VWY9	HATPase_c domain-containing protein.	Tr-type G domain-containing protein.	0.589
A0A060VW47	A0A060W3W8	A0A060VW47	A0A060W3W8	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.827
A0A060VW47	A0A060W5Y1	A0A060VW47	A0A060W5Y1	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.827
A0A060VW47	A0A060WD91	A0A060VW47	A0A060WD91	HATPase_c domain-containing protein.	Tr-type G domain-containing protein.	0.412
A0A060VW47	A0A060WT77	A0A060VW47	A0A060WT77	HATPase_c domain-containing protein.	Uncharacterized protein.	0.887
A0A060VW47	A0A060WYM7	A0A060VW47	A0A060WYM7	HATPase_c domain-containing protein.	Tr-type G domain-containing protein.	0.589
A0A060VW47	A0A060XC61	A0A060VW47	A0A060XC61	HATPase_c domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.439