(83 nodes) K Homology domain, type 1 superfamily network (Oncorhynchus mykiss)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A060Z588	KH domain-containing protein. (127 aa)
	A0A060VTR5	Uncharacterized protein. (587 aa)
	A0A060VRN0	RING-type domain-containing protein. (531 aa)
	A0A060XKH5	CCHC-type domain-containing protein. (651 aa)
	A0A060XM47	KH domain-containing protein. (250 aa)
	A0A060XM80	S1 motif domain-containing protein. (803 aa)
	A0A060XMC0	CCHC-type domain-containing protein. (407 aa)
	A0A060XPN4	Uncharacterized protein. (500 aa)
	A0A060XSJ1	Uncharacterized protein. (468 aa)
	A0A060XTM5	Uncharacterized protein. (642 aa)
	A0A060XVF8	Tudor domain-containing protein. (727 aa)
	A0A060XW15	Uncharacterized protein. (318 aa)
	A0A060XWN9	RING-type domain-containing protein. (501 aa)
	A0A060Y2G9	Uncharacterized protein. (1124 aa)
	A0A060Y3K9	ANK_REP_REGION domain-containing protein. (1581 aa)
	A0A060Y3P5	KH domain-containing protein. (135 aa)
	A0A060Y651	Uncharacterized protein. (332 aa)
	A0A060Y8M3	Tudor domain-containing protein. (956 aa)
	A0A060YAX7	Uncharacterized protein. (298 aa)
	A0A060YBM3	Uncharacterized protein. (146 aa)
	A0A060YCP9	RING-type domain-containing protein. (510 aa)
	A0A060YET4	RNase_Zc3h12a domain-containing protein. (946 aa)
	A0A060YG19	RING-type domain-containing protein. (600 aa)
	A0A060YG25	Uncharacterized protein. (389 aa)
	A0A060YG97	Uncharacterized protein. (161 aa)
	A0A060YGR0	Uncharacterized protein. (253 aa)
	A0A060YH84	ANK_REP_REGION domain-containing protein. (810 aa)
	A0A060YI32	Uncharacterized protein. (227 aa)
	A0A060YIG5	Uncharacterized protein. (410 aa)
	A0A060YJE9	Tudor domain-containing protein. (802 aa)
	A0A060YKY6	KH_dom_type_1 domain-containing protein. (247 aa)
	A0A060YLB1	Uncharacterized protein. (573 aa)
	A0A060YRJ9	RING-type domain-containing protein. (403 aa)
	A0A060YRV3	KH_dom_type_1 domain-containing protein. (84 aa)
	A0A060YSZ5	KH domain-containing protein. (169 aa)
	A0A060YTS6	KH domain-containing protein. (131 aa)
	A0A060YV02	Uncharacterized protein. (117 aa)
	A0A060YVP4	KH_dom_type_1 domain-containing protein. (141 aa)
	A0A060Z3Y9	KH_8 domain-containing protein. (164 aa)
	A0A060VUY9	S1 motif domain-containing protein. (295 aa)
	A0A060Z8W6	KH domain-containing protein. (157 aa)
	A0A060ZEC4	Uncharacterized protein. (353 aa)
	A0A060ZFT6	KH domain-containing protein. (139 aa)
	A0A060WNU9	KH domain-containing protein. (292 aa)
	A0A060WQZ4	Uncharacterized protein. (318 aa)
	A0A060WTG2	S1 motif domain-containing protein. (770 aa)
	A0A060WU72	KH domain-containing protein. (377 aa)
	A0A060WWB2	Uncharacterized protein. (458 aa)
	A0A060WWS4	Uncharacterized protein. (302 aa)
	A0A060WX66	RING-type domain-containing protein. (516 aa)
	A0A060WMS0	Uncharacterized protein. (562 aa)
	A0A060WI55	ANK_REP_REGION domain-containing protein. (2567 aa)
	A0A060WZF3	Quaking_NLS domain-containing protein. (165 aa)
	A0A060X1W4	SAM domain-containing protein. (944 aa)
	A0A060X3H9	Uncharacterized protein. (670 aa)
	A0A060X5W8	Uncharacterized protein. (602 aa)
	A0A060X8N4	Uncharacterized protein. (432 aa)
	A0A060X8Q5	RNase_Zc3h12a domain-containing protein. (611 aa)
	A0A060XDY4	KH domain-containing protein. (293 aa)
	A0A060XFA2	Uncharacterized protein. (434 aa)
	A0A060WHP5	SAM domain-containing protein. (873 aa)
	A0A060WGR4	Uncharacterized protein. (440 aa)
	A0A060WFJ6	KH domain-containing protein. (381 aa)
	A0A060XFB7	Uncharacterized protein. (741 aa)
	A0A060XFL2	Uncharacterized protein. (329 aa)
	A0A060XG45	Uncharacterized protein. (636 aa)
	A0A060XGK0	Uncharacterized protein. (224 aa)
	A0A060XH11	Uncharacterized protein. (353 aa)
	A0A060WEW2	Uncharacterized protein. (473 aa)
	A0A060WCI9	Uncharacterized protein. (949 aa)
	A0A060W9N4	RNase_Zc3h12a domain-containing protein. (1065 aa)
	A0A060W7Y7	KH domain-containing protein. (341 aa)
	A0A060W7P4	Uncharacterized protein. (295 aa)
	A0A060W705	Uncharacterized protein. (369 aa)
	A0A060W6V8	Uncharacterized protein. (575 aa)
	A0A060W4L2	Uncharacterized protein. (672 aa)
	A0A060W2J9	KH_dom_type_1 domain-containing protein. (241 aa)
	A0A060W2E6	RRM domain-containing protein. (536 aa)
	A0A060W1V0	Uncharacterized protein. (336 aa)
	A0A060W091	Uncharacterized protein. (598 aa)
	A0A060VZX0	Uncharacterized protein. (223 aa)
	A0A060VZF4	Uncharacterized protein. (572 aa)
	A0A060VY96	KH domain-containing protein. (377 aa)

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VTR5	A0A060W4L2	Uncharacterized protein.	Uncharacterized protein.	0.962
A0A060VTR5	A0A060WMS0	Uncharacterized protein.	Uncharacterized protein.	0.962
A0A060VTR5	A0A060WWB2	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A060VTR5	A0A060XFB7	Uncharacterized protein.	Uncharacterized protein.	0.962
A0A060VUY9	A0A060W091	S1 motif domain-containing protein.	Uncharacterized protein.	0.612
A0A060VUY9	A0A060W2J9	S1 motif domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.998
A0A060VUY9	A0A060W6V8	S1 motif domain-containing protein.	Uncharacterized protein.	0.612
A0A060VUY9	A0A060W7P4	S1 motif domain-containing protein.	Uncharacterized protein.	0.543
A0A060VUY9	A0A060WTG2	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.436
A0A060VUY9	A0A060XM47	S1 motif domain-containing protein.	KH domain-containing protein.	0.721
A0A060VUY9	A0A060XM80	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.436
A0A060VUY9	A0A060XPN4	S1 motif domain-containing protein.	Uncharacterized protein.	0.612
A0A060VUY9	A0A060XTM5	S1 motif domain-containing protein.	Uncharacterized protein.	0.677
A0A060VUY9	A0A060YG25	S1 motif domain-containing protein.	Uncharacterized protein.	0.612
A0A060VUY9	A0A060YGR0	S1 motif domain-containing protein.	Uncharacterized protein.	0.906
A0A060VUY9	A0A060YIG5	S1 motif domain-containing protein.	Uncharacterized protein.	0.677
A0A060VUY9	A0A060YRV3	S1 motif domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.612
A0A060VUY9	A0A060YSZ5	S1 motif domain-containing protein.	KH domain-containing protein.	0.677
A0A060VUY9	A0A060YTS6	S1 motif domain-containing protein.	KH domain-containing protein.	0.677
A0A060VUY9	A0A060Z3Y9	S1 motif domain-containing protein.	KH_8 domain-containing protein.	0.906