STRINGSTRING
A0A060XDZ0 A0A060XDZ0 A0A060VLZ9 A0A060VLZ9 A0A060VMU1 A0A060VMU1 A0A060VRY4 A0A060VRY4 A0A060VSD6 A0A060VSD6 A0A060VU69 A0A060VU69 A0A060VVS3 A0A060VVS3 A0A060W2F0 A0A060W2F0 A0A060W749 A0A060W749 A0A060WGD3 A0A060WGD3 A0A060WJJ7 A0A060WJJ7 A0A060WLJ2 A0A060WLJ2 A0A060WLP1 A0A060WLP1 A0A060WMM7 A0A060WMM7 A0A060WQG6 A0A060WQG6 A0A060WQL8 A0A060WQL8 A0A060WRH2 A0A060WRH2 A0A060WS49 A0A060WS49 A0A060WSB9 A0A060WSB9 A0A060WSC1 A0A060WSC1 A0A060WSU4 A0A060WSU4 A0A060WTP4 A0A060WTP4 A0A060WTW6 A0A060WTW6 A0A060WUM9 A0A060WUM9 A0A060WW34 A0A060WW34 A0A060X205 A0A060X205 A0A060X6D0 A0A060X6D0 A0A060X6D7 A0A060X6D7 A0A060X6K3 A0A060X6K3 A0A060X6S7 A0A060X6S7 A0A060X8S4 A0A060X8S4 A0A060X9T4 A0A060X9T4 A0A060XAU8 A0A060XAU8 A0A060XC05 A0A060XC05 A0A060XCM1 A0A060XCM1 A0A060XDQ4 A0A060XDQ4 A0A060XGE0 A0A060XGE0 A0A060XGI1 A0A060XGI1 A0A060XHM2 A0A060XHM2 A0A060XIK5 A0A060XIK5 A0A060XK05 A0A060XK05 A0A060XKE6 A0A060XKE6 A0A060XL38 A0A060XL38 A0A060XLN0 A0A060XLN0 A0A060XNV6 A0A060XNV6 A0A060XPN1 A0A060XPN1 A0A060XPT1 A0A060XPT1 A0A060XQ40 A0A060XQ40 A0A060XR42 A0A060XR42 A0A060XSB3 A0A060XSB3 A0A060XTQ0 A0A060XTQ0 A0A060XTZ0 A0A060XTZ0 A0A060XUU8 A0A060XUU8 A0A060XVY0 A0A060XVY0 A0A060XWW5 A0A060XWW5 A0A060XX02 A0A060XX02 A0A060XXJ1 A0A060XXJ1 A0A060XXY6 A0A060XXY6 A0A060XY19 A0A060XY19 A0A060XYU5 A0A060XYU5 A0A060XZK1 A0A060XZK1 A0A060XZX0 A0A060XZX0 A0A060Y083 A0A060Y083 A0A060Y0Z8 A0A060Y0Z8 A0A060Y115 A0A060Y115 A0A060Y182 A0A060Y182 A0A060Y1E2 A0A060Y1E2 A0A060Y1I2 A0A060Y1I2 A0A060Y1T7 A0A060Y1T7 A0A060Y436 A0A060Y436 A0A060Y461 A0A060Y461 A0A060Y478 A0A060Y478 A0A060Y5Y0 A0A060Y5Y0 A0A060Y653 A0A060Y653 A0A060Y8L9 A0A060Y8L9 A0A060Y9T7 A0A060Y9T7 A0A060YAH5 A0A060YAH5 A0A060YAY5 A0A060YAY5 A0A060YB60 A0A060YB60 A0A060YBM4 A0A060YBM4 A0A060YBX5 A0A060YBX5 A0A060YDG9 A0A060YDG9 A0A060YDM5 A0A060YDM5 A0A060YG05 A0A060YG05 A0A060YG13 A0A060YG13 A0A060YHE4 A0A060YHE4 A0A060YHL9 A0A060YHL9 A0A060YHU8 A0A060YHU8 A0A060YHY8 A0A060YHY8 A0A060YIG4 A0A060YIG4 A0A060YIP1 A0A060YIP1 A0A060YIW0 A0A060YIW0 A0A060YJ34 A0A060YJ34 A0A060YJK2 A0A060YJK2 A0A060YJZ6 A0A060YJZ6 A0A060YQD2 A0A060YQD2 A0A060YR33 A0A060YR33 A0A060YRD1 A0A060YRD1 A0A060YYE3 A0A060YYE3 A0A060YYU4 A0A060YYU4 A0A060YYU7 A0A060YYU7 A0A060YZ18 A0A060YZ18 A0A060Z0R5 A0A060Z0R5 A0A060Z305 A0A060Z305 A0A060Z4Q9 A0A060Z4Q9 A0A060Z5X3 A0A060Z5X3 A0A060Z655 A0A060Z655 A0A060Z7E2 A0A060Z7E2 A0A060ZBY4 A0A060ZBY4 A0A060ZE36 A0A060ZE36 A0A061A5F3 A0A061A5F3 A0A061A7F1 A0A061A7F1 A0A061ACL8 A0A061ACL8 RBX1 RBX1 TF2H5 TF2H5 RFA3 RFA3 CHRC1 CHRC1 W5S0E9_ONCMY W5S0E9_ONCMY W5S4C9_ONCMY W5S4C9_ONCMY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A060XDZ0Uncharacterized protein. (78 aa)
A0A060VLZ9CPSF_A domain-containing protein. (1144 aa)
A0A060VMU1MAT1 domain-containing protein. (129 aa)
A0A060VRY4XPA_C domain-containing protein. (274 aa)
A0A060VSD6CBFD_NFYB_HMF domain-containing protein. (131 aa)
A0A060VU69RPA_C domain-containing protein. (278 aa)
A0A060VVS3XPA_C domain-containing protein. (278 aa)
A0A060W2F0Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)
A0A060W749C2H2-type domain-containing protein. (1109 aa)
A0A060WGD3Uncharacterized protein. (311 aa)
A0A060WJJ7Uncharacterized protein. (194 aa)
A0A060WLJ2DNA_ligase_A_N domain-containing protein. (120 aa)
A0A060WLP1Uncharacterized protein. (538 aa)
A0A060WMM7DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2293 aa)
A0A060WQG6Uncharacterized protein. (105 aa)
A0A060WQL8CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (310 aa)
A0A060WRH2Uncharacterized protein. (581 aa)
A0A060WS49CULLIN_2 domain-containing protein; Belongs to the cullin family. (874 aa)
A0A060WSB9ATPase_AAA_core domain-containing protein. (139 aa)
A0A060WSC1Uncharacterized protein. (448 aa)
A0A060WSU4Helicase ATP-binding domain-containing protein. (736 aa)
A0A060WTP4Rep_fac_C domain-containing protein. (209 aa)
A0A060WTW6AAA domain-containing protein. (353 aa)
A0A060WUM9Uncharacterized protein. (185 aa)
A0A060WW34Rep_fac-A_C domain-containing protein. (286 aa)
A0A060X205Uncharacterized protein. (145 aa)
A0A060X6D0ATPase_AAA_core domain-containing protein. (1134 aa)
A0A060X6D7CPSF_A domain-containing protein. (1143 aa)
A0A060X6K3RING-type domain-containing protein. (105 aa)
A0A060X6S7F-box domain-containing protein. (479 aa)
A0A060X8S4Uncharacterized protein. (80 aa)
A0A060X9T4Cullin domain-containing protein; Belongs to the cullin family. (123 aa)
A0A060XAU8Uncharacterized protein. (387 aa)
A0A060XC05BHD_1 domain-containing protein. (764 aa)
A0A060XCM1CBFD_NFYB_HMF domain-containing protein. (118 aa)
A0A060XDQ4F-box domain-containing protein. (707 aa)
A0A060XGE0CULLIN_2 domain-containing protein; Belongs to the cullin family. (374 aa)
A0A060XGI1DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
A0A060XHM2Cullin_Nedd8 domain-containing protein. (96 aa)
A0A060XIK5CBFD_NFYB_HMF domain-containing protein. (151 aa)
A0A060XK05SH2 domain-containing protein. (401 aa)
A0A060XKE6Rep_fac_C domain-containing protein. (209 aa)
A0A060XL38Uncharacterized protein. (139 aa)
A0A060XLN0Uncharacterized protein. (325 aa)
A0A060XNV6RPA_C domain-containing protein. (253 aa)
A0A060XPN1Rep_fac-A_C domain-containing protein. (121 aa)
A0A060XPT1Rep-A_N domain-containing protein. (134 aa)
A0A060XQ40Uncharacterized protein. (1366 aa)
A0A060XR42Uncharacterized protein. (1267 aa)
A0A060XSB3Uncharacterized protein. (341 aa)
A0A060XTQ0C2H2-type domain-containing protein. (1158 aa)
A0A060XTZ0C2H2-type domain-containing protein. (843 aa)
A0A060XUU8Uncharacterized protein. (464 aa)
A0A060XVY0Uncharacterized protein. (379 aa)
A0A060XWW5Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (402 aa)
A0A060XX02Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (446 aa)
A0A060XXJ1Rep_fac-A_C domain-containing protein. (131 aa)
A0A060XXY6WD_REPEATS_REGION domain-containing protein. (293 aa)
A0A060XY19ERCC4 domain-containing protein. (893 aa)
A0A060XYU5STN1_2 domain-containing protein. (248 aa)
A0A060XZK1Helicase ATP-binding domain-containing protein. (955 aa)
A0A060XZX0Ssl1 domain-containing protein. (215 aa)
A0A060Y083Uncharacterized protein. (502 aa)
A0A060Y0Z8SH2 domain-containing protein. (448 aa)
A0A060Y115Uncharacterized protein. (107 aa)
A0A060Y182Uncharacterized protein. (383 aa)
A0A060Y1E2CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (369 aa)
A0A060Y1I2Uncharacterized protein. (343 aa)
A0A060Y1T7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (345 aa)
A0A060Y436General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (572 aa)
A0A060Y461Uncharacterized protein. (104 aa)
A0A060Y478Uncharacterized protein. (162 aa)
A0A060Y5Y0RPA_C domain-containing protein. (266 aa)
A0A060Y653AAA domain-containing protein. (335 aa)
A0A060Y8L9Uncharacterized protein. (339 aa)
A0A060Y9T7Uncharacterized protein. (918 aa)
A0A060YAH5Uncharacterized protein. (467 aa)
A0A060YAY5zf-C4pol domain-containing protein. (61 aa)
A0A060YB60TFIIIC_sub6 domain-containing protein. (155 aa)
A0A060YBM4ATPase_AAA_core domain-containing protein. (350 aa)
A0A060YBX5Uncharacterized protein. (184 aa)
A0A060YDG9Uncharacterized protein. (173 aa)
A0A060YDM5WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (449 aa)
A0A060YG05Uncharacterized protein. (374 aa)
A0A060YG13Uncharacterized protein. (355 aa)
A0A060YHE4DNA_LIGASE_A3 domain-containing protein. (118 aa)
A0A060YHL9Uncharacterized protein. (117 aa)
A0A060YHU8CYCLIN domain-containing protein; Belongs to the cyclin family. (323 aa)
A0A060YHY8DNA_ligase_A_N domain-containing protein. (749 aa)
A0A060YIG4DNA_LIGASE_A3 domain-containing protein. (151 aa)
A0A060YIP1Protein kinase domain-containing protein. (180 aa)
A0A060YIW0Uncharacterized protein. (537 aa)
A0A060YJ34Uncharacterized protein. (123 aa)
A0A060YJK2Uncharacterized protein. (177 aa)
A0A060YJZ6STN1_2 domain-containing protein. (155 aa)
A0A060YQD2Uncharacterized protein. (229 aa)
A0A060YR33Uncharacterized protein. (146 aa)
A0A060YRD1Uncharacterized protein. (137 aa)
A0A060YYE3Uncharacterized protein. (221 aa)
A0A060YYU4CBFD_NFYB_HMF domain-containing protein. (84 aa)
A0A060YYU7XPGN domain-containing protein. (60 aa)
A0A060YZ18CULLIN_2 domain-containing protein; Belongs to the cullin family. (203 aa)
A0A060Z0R5Uncharacterized protein. (230 aa)
A0A060Z305C2H2-type domain-containing protein. (927 aa)
A0A060Z4Q9C2H2-type domain-containing protein. (298 aa)
A0A060Z5X3WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (236 aa)
A0A060Z655Uncharacterized protein. (100 aa)
A0A060Z7E2Uncharacterized protein. (162 aa)
A0A060ZBY4Uncharacterized protein. (433 aa)
A0A060ZE36XPGN domain-containing protein. (45 aa)
A0A061A5F3Uncharacterized protein. (204 aa)
A0A061A7F1Helicase ATP-binding domain-containing protein. (128 aa)
A0A061ACL8Uncharacterized protein. (160 aa)
RBX1RING-box protein 1. (108 aa)
TF2H5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)
RFA3Replication protein A 14 kDa subunit. (121 aa)
CHRC1Chromatin accessibility complex protein 1. (115 aa)
W5S0E9_ONCMYProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
W5S4C9_ONCMYProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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