STRINGSTRING
A0A060XBJ2 A0A060XBJ2 A0A060VPC8 A0A060VPC8 A0A060VPK4 A0A060VPK4 A0A060VPV4 A0A060VPV4 A0A060VU69 A0A060VU69 A0A060VUS2 A0A060VUS2 A0A060VUZ4 A0A060VUZ4 A0A060VVE7 A0A060VVE7 A0A060VWP1 A0A060VWP1 A0A060VWT0 A0A060VWT0 A0A060W1U5 A0A060W1U5 A0A060W1Z9 A0A060W1Z9 A0A060W2I6 A0A060W2I6 A0A060W2W9 A0A060W2W9 A0A060W3B9 A0A060W3B9 A0A060W3K2 A0A060W3K2 A0A060W5V1 A0A060W5V1 A0A060W716 A0A060W716 A0A060W7K8 A0A060W7K8 A0A060W872 A0A060W872 A0A060W8Q8 A0A060W8Q8 A0A060W9L6 A0A060W9L6 A0A060W9X9 A0A060W9X9 A0A060WAB5 A0A060WAB5 A0A060WAM6 A0A060WAM6 A0A060WAY2 A0A060WAY2 A0A060WCP3 A0A060WCP3 A0A060WCV8 A0A060WCV8 A0A060WDQ4 A0A060WDQ4 A0A060WDX8 A0A060WDX8 A0A060WE07 A0A060WE07 A0A060WEB4 A0A060WEB4 SLX1 SLX1 A0A060WH56 A0A060WH56 A0A060WHD6 A0A060WHD6 A0A060WIL1 A0A060WIL1 A0A060WIU4 A0A060WIU4 A0A060WIX0 A0A060WIX0 A0A060WJ17 A0A060WJ17 A0A060WJD4 A0A060WJD4 A0A060WK21 A0A060WK21 A0A060WKD2 A0A060WKD2 RTEL1 RTEL1 A0A060WLM0 A0A060WLM0 A0A060WLW5 A0A060WLW5 A0A060WN95 A0A060WN95 A0A060WQG6 A0A060WQG6 A0A060WRH2 A0A060WRH2 A0A060WS25 A0A060WS25 A0A060WUL5 A0A060WUL5 A0A060WW06 A0A060WW06 A0A060WW34 A0A060WW34 A0A060WW86 A0A060WW86 A0A060WXB3 A0A060WXB3 A0A060WYE6 A0A060WYE6 A0A060WZ94 A0A060WZ94 A0A060WZW0 A0A060WZW0 A0A060WZX5 A0A060WZX5 A0A060X151 A0A060X151 A0A060X1P9 A0A060X1P9 A0A060X1T4 A0A060X1T4 A0A060X248 A0A060X248 A0A060X3S8 A0A060X3S8 A0A060X4K1 A0A060X4K1 A0A060X729 A0A060X729 A0A060XCA3 A0A060XCA3 A0A060XHQ3 A0A060XHQ3 A0A060XI47 A0A060XI47 A0A060XIX5 A0A060XIX5 A0A060XJU7 A0A060XJU7 A0A060XLY4 A0A060XLY4 A0A060XMA3 A0A060XMA3 A0A060XN85 A0A060XN85 A0A060XNV6 A0A060XNV6 A0A060XPI0 A0A060XPI0 A0A060XPN1 A0A060XPN1 A0A060XPT1 A0A060XPT1 A0A060XQV6 A0A060XQV6 A0A060XR10 A0A060XR10 A0A060XRB0 A0A060XRB0 A0A060XSZ6 A0A060XSZ6 A0A060XVQ5 A0A060XVQ5 A0A060XW94 A0A060XW94 A0A060XWS1 A0A060XWS1 A0A060XWU6 A0A060XWU6 A0A060XWW5 A0A060XWW5 A0A060XX02 A0A060XX02 A0A060XX03 A0A060XX03 A0A060XXA9 A0A060XXA9 A0A060XXJ1 A0A060XXJ1 A0A060XY19 A0A060XY19 A0A060XYH4 A0A060XYH4 A0A060Y461 A0A060Y461 A0A060Y4H5 A0A060Y4H5 A0A060Y593 A0A060Y593 A0A060Y5Y0 A0A060Y5Y0 A0A060Y6A5 A0A060Y6A5 A0A060Y6X9 A0A060Y6X9 A0A060Y7H3 A0A060Y7H3 A0A060Y7K9 A0A060Y7K9 A0A060Y875 A0A060Y875 A0A060Y933 A0A060Y933 A0A060YBW6 A0A060YBW6 A0A060YBZ5 A0A060YBZ5 A0A060YCP2 A0A060YCP2 A0A060YEH1 A0A060YEH1 A0A060YEJ5 A0A060YEJ5 A0A060YF42 A0A060YF42 A0A060YHR1 A0A060YHR1 A0A060YI60 A0A060YI60 A0A060YK06 A0A060YK06 A0A060YK39 A0A060YK39 A0A060YMX7 A0A060YMX7 A0A060YQ58 A0A060YQ58 A0A060YR40 A0A060YR40 A0A060YR45 A0A060YR45 A0A060YRS8 A0A060YRS8 A0A060YT06 A0A060YT06 A0A060YW05 A0A060YW05 A0A060YWC2 A0A060YWC2 A0A060YZI1 A0A060YZI1 A0A060Z0R5 A0A060Z0R5 A0A060Z1L9 A0A060Z1L9 A0A060Z3S0 A0A060Z3S0 A0A060Z3Y6 A0A060Z3Y6 A0A060Z491 A0A060Z491 A0A060Z6I7 A0A060Z6I7 A0A060Z765 A0A060Z765 A0A060ZAM3 A0A060ZAM3 A0A060ZBM2 A0A060ZBM2 A0A060ZE55 A0A060ZE55 A0A060ZIH0 A0A060ZIH0 A0A061A2T2 A0A061A2T2 A0A061AEY4 A0A061AEY4 RFA3 RFA3 NTF2 NTF2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A060XBJ2Calponin-homology (CH) domain-containing protein. (499 aa)
A0A060VPC8LIM zinc-binding domain-containing protein. (337 aa)
A0A060VPK4BMERB domain-containing protein. (1017 aa)
A0A060VPV4DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (335 aa)
A0A060VU69RPA_C domain-containing protein. (278 aa)
A0A060VUS2DNA_mis_repair domain-containing protein. (725 aa)
A0A060VUZ4Uncharacterized protein. (258 aa)
A0A060VVE7Uncharacterized protein. (267 aa)
A0A060VWP1Uncharacterized protein. (1272 aa)
A0A060VWT0FAD_binding_3 domain-containing protein. (763 aa)
A0A060W1U5Uncharacterized protein. (1325 aa)
A0A060W1Z9Uncharacterized protein. (535 aa)
A0A060W2I6ERCC4 domain-containing protein. (449 aa)
A0A060W2W9Uncharacterized protein. (264 aa)
A0A060W3B9Uncharacterized protein. (166 aa)
A0A060W3K2FAD_binding_3 domain-containing protein. (415 aa)
A0A060W5V1Uncharacterized protein. (708 aa)
A0A060W716Fanconi_A_N domain-containing protein. (970 aa)
A0A060W7K8Uncharacterized protein. (522 aa)
A0A060W872WD_REPEATS_REGION domain-containing protein. (677 aa)
A0A060W8Q8Uncharacterized protein. (57 aa)
A0A060W9L6FAD_binding_3 domain-containing protein. (504 aa)
A0A060W9X9Uncharacterized protein. (1563 aa)
A0A060WAB5Uncharacterized protein. (396 aa)
A0A060WAM6BMERB domain-containing protein. (256 aa)
A0A060WAY2FAD_binding_3 domain-containing protein. (211 aa)
A0A060WCP3Uncharacterized protein. (1374 aa)
A0A060WCV8LIM zinc-binding domain-containing protein. (470 aa)
A0A060WDQ4PITH domain-containing protein. (209 aa)
A0A060WDX8UmuC domain-containing protein. (912 aa)
A0A060WE07Uncharacterized protein. (622 aa)
A0A060WEB4Helicase ATP-binding domain-containing protein. (340 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (263 aa)
A0A060WH56DUF1767 domain-containing protein. (497 aa)
A0A060WHD6Uncharacterized protein. (133 aa)
A0A060WIL1Uncharacterized protein. (1980 aa)
A0A060WIU4FAD_binding_3 domain-containing protein. (266 aa)
A0A060WIX0WD_REPEATS_REGION domain-containing protein. (676 aa)
A0A060WJ17Uncharacterized protein. (2902 aa)
A0A060WJD4Uncharacterized protein. (206 aa)
A0A060WK21BLM_N domain-containing protein. (317 aa)
A0A060WKD2Uncharacterized protein. (1070 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1135 aa)
A0A060WLM0Helicase C-terminal domain-containing protein. (1769 aa)
A0A060WLW5RING-type domain-containing protein. (1027 aa)
A0A060WN95Uncharacterized protein. (191 aa)
A0A060WQG6Uncharacterized protein. (105 aa)
A0A060WRH2Uncharacterized protein. (581 aa)
A0A060WS25Uncharacterized protein. (547 aa)
A0A060WUL5RECA_2 domain-containing protein. (363 aa)
A0A060WW06DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
A0A060WW34Rep_fac-A_C domain-containing protein. (286 aa)
A0A060WW86Uncharacterized protein. (250 aa)
A0A060WXB3FAD_binding_3 domain-containing protein. (348 aa)
A0A060WYE6Uncharacterized protein. (710 aa)
A0A060WZ94Uncharacterized protein. (905 aa)
A0A060WZW0Uncharacterized protein. (847 aa)
A0A060WZX5Uncharacterized protein. (861 aa)
A0A060X151UmuC domain-containing protein. (392 aa)
A0A060X1P9Uncharacterized protein. (202 aa)
A0A060X1T4G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (352 aa)
A0A060X248Uncharacterized protein. (423 aa)
A0A060X3S8RING-type domain-containing protein. (371 aa)
A0A060X4K1UmuC domain-containing protein. (668 aa)
A0A060X729NTF2 domain-containing protein. (106 aa)
A0A060XCA3FAD_binding_3 domain-containing protein. (143 aa)
A0A060XHQ3Uncharacterized protein. (397 aa)
A0A060XI47WD_REPEATS_REGION domain-containing protein. (680 aa)
A0A060XIX5LIM zinc-binding domain-containing protein. (193 aa)
A0A060XJU7Uncharacterized protein. (270 aa)
A0A060XLY4Uncharacterized protein. (147 aa)
A0A060XMA3Uncharacterized protein. (139 aa)
A0A060XN85HELICc2 domain-containing protein. (130 aa)
A0A060XNV6RPA_C domain-containing protein. (253 aa)
A0A060XPI0BHLH domain-containing protein. (205 aa)
A0A060XPN1Rep_fac-A_C domain-containing protein. (121 aa)
A0A060XPT1Rep-A_N domain-containing protein. (134 aa)
A0A060XQV6Helicase ATP-binding domain-containing protein. (961 aa)
A0A060XR10UmuC domain-containing protein. (695 aa)
A0A060XRB0Ubiquitin carboxyl-terminal hydrolase. (789 aa)
A0A060XSZ6Uncharacterized protein. (205 aa)
A0A060XVQ5Uncharacterized protein. (440 aa)
A0A060XW94DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (259 aa)
A0A060XWS1BHLH domain-containing protein. (173 aa)
A0A060XWU6Uncharacterized protein. (165 aa)
A0A060XWW5Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (402 aa)
A0A060XX02Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (446 aa)
A0A060XX03DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (375 aa)
A0A060XXA9DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (877 aa)
A0A060XXJ1Rep_fac-A_C domain-containing protein. (131 aa)
A0A060XY19ERCC4 domain-containing protein. (893 aa)
A0A060XYH4FA_FANCE domain-containing protein. (524 aa)
A0A060Y461Uncharacterized protein. (104 aa)
A0A060Y4H5Tower domain-containing protein. (2355 aa)
A0A060Y593Uncharacterized protein. (314 aa)
A0A060Y5Y0RPA_C domain-containing protein. (266 aa)
A0A060Y6A5UmuC domain-containing protein. (724 aa)
A0A060Y6X9Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (254 aa)
A0A060Y7H3Telomere_reg-2 domain-containing protein. (839 aa)
A0A060Y7K9Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (634 aa)
A0A060Y875BTB domain-containing protein. (1208 aa)
A0A060Y933Uncharacterized protein. (267 aa)
A0A060YBW6Uncharacterized protein. (146 aa)
A0A060YBZ5Uncharacterized protein. (290 aa)
A0A060YCP2Uncharacterized protein. (569 aa)
A0A060YEH1POLAc domain-containing protein. (113 aa)
A0A060YEJ5Uncharacterized protein. (317 aa)
A0A060YF42Uncharacterized protein. (493 aa)
A0A060YHR1BMERB domain-containing protein. (185 aa)
A0A060YI60DNA_pol_B domain-containing protein. (85 aa)
A0A060YK06NTP_transf_2 domain-containing protein. (409 aa)
A0A060YK39NTF2 domain-containing protein. (127 aa)
A0A060YMX7Uncharacterized protein. (289 aa)
A0A060YQ58DNA_pol_B domain-containing protein. (120 aa)
A0A060YR40Uncharacterized protein. (340 aa)
A0A060YR45Uncharacterized protein. (144 aa)
A0A060YRS8Uncharacterized protein. (986 aa)
A0A060YT06Uncharacterized protein. (124 aa)
A0A060YW05FAT domain-containing protein. (2080 aa)
A0A060YWC2UBIQUITIN_CONJUGAT_2 domain-containing protein. (192 aa)
A0A060YZI1Uncharacterized protein. (137 aa)
A0A060Z0R5Uncharacterized protein. (230 aa)
A0A060Z1L9Uncharacterized protein. (200 aa)
A0A060Z3S0Uncharacterized protein. (46 aa)
A0A060Z3Y6Uncharacterized protein. (171 aa)
A0A060Z491Uncharacterized protein. (770 aa)
A0A060Z6I7Uncharacterized protein. (151 aa)
A0A060Z765Calponin-homology (CH) domain-containing protein. (68 aa)
A0A060ZAM3Uncharacterized protein. (353 aa)
A0A060ZBM2Uncharacterized protein. (269 aa)
A0A060ZE55Uncharacterized protein. (312 aa)
A0A060ZIH0BRCT domain-containing protein. (615 aa)
A0A061A2T2Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (115 aa)
A0A061AEY4Uncharacterized protein. (42 aa)
RFA3Replication protein A 14 kDa subunit. (121 aa)
NTF2Nuclear transport factor 2. (128 aa)
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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