13 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCFC1	Host cell factor 1-like isoform X2. (1692 aa)
	LOC106565169	Ubiquitin carboxyl-terminal hydrolase. (737 aa)
	ENSSSAP00000044813	Host cell factor 1-like. (1425 aa)
	LOC106609287	Host cell factor 2-like isoform X1. (771 aa)
	LOC106566343	Host cell factor 1-like isoform X2. (1704 aa)
	LOC106583439	Ubiquitin carboxyl-terminal hydrolase. (744 aa)
	ENSSSAP00000077028	annotation not available (621 aa)
	OGT	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4. (1072 aa)
	LOC106611331	Putative Polycomb group protein ASXL2 isoform X3. (1471 aa)
	LOC106604253	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8. (1065 aa)
	LOC106576181	Host cell factor 2-like. (773 aa)
	LOC106578866	Forkhead box protein K2-like. (614 aa)
	LOC106603742	Putative Polycomb group protein ASXL2 isoform X2. (1433 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000044813	ENSSSAP00000077028	ENSSSAP00000044813	ENSSSAP00000077028	Host cell factor 1-like.	annotation not available	0.646
ENSSSAP00000044813	LOC106565169	ENSSSAP00000044813	ENSSSAP00000035048	Host cell factor 1-like.	Ubiquitin carboxyl-terminal hydrolase.	0.883
ENSSSAP00000044813	LOC106576181	ENSSSAP00000044813	ENSSSAP00000096439	Host cell factor 1-like.	Host cell factor 2-like.	0.902
ENSSSAP00000044813	LOC106578866	ENSSSAP00000044813	ENSSSAP00000106353	Host cell factor 1-like.	Forkhead box protein K2-like.	0.646
ENSSSAP00000044813	LOC106583439	ENSSSAP00000044813	ENSSSAP00000073482	Host cell factor 1-like.	Ubiquitin carboxyl-terminal hydrolase.	0.883
ENSSSAP00000044813	LOC106603742	ENSSSAP00000044813	ENSSSAP00000111389	Host cell factor 1-like.	Putative Polycomb group protein ASXL2 isoform X2.	0.725
ENSSSAP00000044813	LOC106604253	ENSSSAP00000044813	ENSSSAP00000083899	Host cell factor 1-like.	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8.	0.928
ENSSSAP00000044813	LOC106609287	ENSSSAP00000044813	ENSSSAP00000050844	Host cell factor 1-like.	Host cell factor 2-like isoform X1.	0.901
ENSSSAP00000044813	LOC106611331	ENSSSAP00000044813	ENSSSAP00000083882	Host cell factor 1-like.	Putative Polycomb group protein ASXL2 isoform X3.	0.725
ENSSSAP00000044813	OGT	ENSSSAP00000044813	ENSSSAP00000081930	Host cell factor 1-like.	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4.	0.928
ENSSSAP00000077028	ENSSSAP00000044813	ENSSSAP00000077028	ENSSSAP00000044813	annotation not available	Host cell factor 1-like.	0.646
ENSSSAP00000077028	HCFC1	ENSSSAP00000077028	ENSSSAP00000020913	annotation not available	Host cell factor 1-like isoform X2.	0.646
ENSSSAP00000077028	LOC106565169	ENSSSAP00000077028	ENSSSAP00000035048	annotation not available	Ubiquitin carboxyl-terminal hydrolase.	0.834
ENSSSAP00000077028	LOC106566343	ENSSSAP00000077028	ENSSSAP00000061757	annotation not available	Host cell factor 1-like isoform X2.	0.646
ENSSSAP00000077028	LOC106576181	ENSSSAP00000077028	ENSSSAP00000096439	annotation not available	Host cell factor 2-like.	0.646
ENSSSAP00000077028	LOC106583439	ENSSSAP00000077028	ENSSSAP00000073482	annotation not available	Ubiquitin carboxyl-terminal hydrolase.	0.834
ENSSSAP00000077028	LOC106603742	ENSSSAP00000077028	ENSSSAP00000111389	annotation not available	Putative Polycomb group protein ASXL2 isoform X2.	0.779
ENSSSAP00000077028	LOC106604253	ENSSSAP00000077028	ENSSSAP00000083899	annotation not available	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8.	0.761
ENSSSAP00000077028	LOC106609287	ENSSSAP00000077028	ENSSSAP00000050844	annotation not available	Host cell factor 2-like isoform X1.	0.646
ENSSSAP00000077028	LOC106611331	ENSSSAP00000077028	ENSSSAP00000083882	annotation not available	Putative Polycomb group protein ASXL2 isoform X3.	0.779