29 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INTS12	Integrator complex subunit 12-like isoform X1. (480 aa)
	LOC106584862	Von Willebrand factor A domain-containing protein 9-like. (157 aa)
	LOC106595167	Integrator complex subunit 1-like. (1175 aa)
	LOC106595167-2	Integrator complex subunit 1-like. (1175 aa)
	LOC106595167-3	Integrator complex subunit 1-like. (1175 aa)
	ENSSSAP00000023927	annotation not available (89 aa)
	ints6l	Protein DDX26B. (906 aa)
	cl011	CL011 protein. (709 aa)
	LOC106576392	Protein asunder homolog isoform X2. (716 aa)
	LOC106601055	Integrator complex subunit 1-like. (1711 aa)
	ints9	Integrator complex subunit 9 isoform X2. (708 aa)
	LOC106588323	Integrator complex subunit 3 isoform X2. (1031 aa)
	LOC106610331	Integrator complex subunit 12-like isoform X1. (488 aa)
	ints7	Integrator complex subunit 7. (970 aa)
	LOC106607338	LOW QUALITY PROTEIN: integrator complex subunit 1-like. (2202 aa)
	LOC106604380	Integrator complex subunit 5-like. (1002 aa)
	ints4	Integrator complex subunit 4. (980 aa)
	ints10	Integrator complex subunit 10. (741 aa)
	LOC106569880	Integrator complex subunit 3-like isoform X2. (1031 aa)
	ENSSSAP00000096020	annotation not available (183 aa)
	ENSSSAP00000096253	Integrator complex subunit 11. (393 aa)
	ENSSSAP00000096262	annotation not available (66 aa)
	ints11	Integrator complex subunit 11. (652 aa)
	LOC106582497	Integrator complex subunit 6-like. (889 aa)
	ENSSSAP00000105998	annotation not available (160 aa)
	ints8	Integrator complex subunit 8 isoform X1. (1008 aa)
	ENSSSAP00000112343	annotation not available (130 aa)
	ENSSSAP00000112425	annotation not available (94 aa)
	ENSSSAP00000113759	annotation not available (206 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000023927	ENSSSAP00000096020	ENSSSAP00000023927	ENSSSAP00000096020	annotation not available	annotation not available	0.959
ENSSSAP00000023927	ENSSSAP00000096253	ENSSSAP00000023927	ENSSSAP00000096253	annotation not available	Integrator complex subunit 11.	0.906
ENSSSAP00000023927	ENSSSAP00000096262	ENSSSAP00000023927	ENSSSAP00000096262	annotation not available	annotation not available	0.906
ENSSSAP00000023927	ENSSSAP00000105998	ENSSSAP00000023927	ENSSSAP00000105998	annotation not available	annotation not available	0.927
ENSSSAP00000023927	ENSSSAP00000112343	ENSSSAP00000023927	ENSSSAP00000112343	annotation not available	annotation not available	0.903
ENSSSAP00000023927	ENSSSAP00000112425	ENSSSAP00000023927	ENSSSAP00000112425	annotation not available	annotation not available	0.903
ENSSSAP00000023927	ENSSSAP00000113759	ENSSSAP00000023927	ENSSSAP00000113759	annotation not available	annotation not available	0.930
ENSSSAP00000023927	INTS12	ENSSSAP00000023927	ENSSSAP00000008414	annotation not available	Integrator complex subunit 12-like isoform X1.	0.927
ENSSSAP00000023927	LOC106569880	ENSSSAP00000023927	ENSSSAP00000091387	annotation not available	Integrator complex subunit 3-like isoform X2.	0.932
ENSSSAP00000023927	LOC106576392	ENSSSAP00000023927	ENSSSAP00000035807	annotation not available	Protein asunder homolog isoform X2.	0.927
ENSSSAP00000023927	LOC106584862	ENSSSAP00000023927	ENSSSAP00000018841	annotation not available	Von Willebrand factor A domain-containing protein 9-like.	0.940
ENSSSAP00000023927	LOC106588323	ENSSSAP00000023927	ENSSSAP00000040131	annotation not available	Integrator complex subunit 3 isoform X2.	0.932
ENSSSAP00000023927	LOC106595167	ENSSSAP00000023927	ENSSSAP00000022040	annotation not available	Integrator complex subunit 1-like.	0.878
ENSSSAP00000023927	LOC106595167-2	ENSSSAP00000023927	ENSSSAP00000022532	annotation not available	Integrator complex subunit 1-like.	0.878
ENSSSAP00000023927	LOC106595167-3	ENSSSAP00000023927	ENSSSAP00000022914	annotation not available	Integrator complex subunit 1-like.	0.878
ENSSSAP00000023927	LOC106601055	ENSSSAP00000023927	ENSSSAP00000038077	annotation not available	Integrator complex subunit 1-like.	0.878
ENSSSAP00000023927	LOC106604380	ENSSSAP00000023927	ENSSSAP00000072306	annotation not available	Integrator complex subunit 5-like.	0.959
ENSSSAP00000023927	LOC106607338	ENSSSAP00000023927	ENSSSAP00000065660	annotation not available	LOW QUALITY PROTEIN: integrator complex subunit 1-like.	0.878
ENSSSAP00000023927	LOC106610331	ENSSSAP00000023927	ENSSSAP00000054087	annotation not available	Integrator complex subunit 12-like isoform X1.	0.927
ENSSSAP00000023927	cl011	ENSSSAP00000023927	ENSSSAP00000034746	annotation not available	CL011 protein.	0.927