STRINGSTRING
LOC106607888 LOC106607888 ENSSSAP00000017215 ENSSSAP00000017215 recql4 recql4 xrcc3 xrcc3 rad51d rad51d rad51 rad51 atm atm brca2 brca2 ENSSSAP00000055319 ENSSSAP00000055319 LOC106582297 LOC106582297 MRE11 MRE11 rad51c rad51c Mre11 Mre11 LOC106590210 LOC106590210 XRCC2 XRCC2 rad51b rad51b rad50 rad50 exo1 exo1 brca1 brca1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
ENSSSAP00000017215annotation not available (115 aa)
recql4ATP-dependent DNA helicase Q4. (1404 aa)
xrcc3DNA repair protein XRCC3. (371 aa)
rad51dDNA repair protein RAD51 homolog 4. (336 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
brca2Breast cancer type 2 susceptibility protein isoform X5. (2826 aa)
ENSSSAP00000055319BRCA1 interacting protein C-terminal helicase 1. (708 aa)
LOC106582297BRCA1-associated RING domain protein 1-like isoform X1. (847 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
rad51cDNA repair protein RAD51 homolog 3. (400 aa)
Mre11MRE11 homolog, double strand break repair nuclease. (452 aa)
LOC106590210DNA endonuclease RBBP8-like. (723 aa)
XRCC2DNA repair protein XRCC2-like. (307 aa)
rad51bDNA repair protein RAD51 homolog 2 isoform X1. (418 aa)
rad50DNA repair protein RAD50. (1316 aa)
exo1Exonuclease 1. (786 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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