10 items (Salmo salar) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106562128	Meiotic recombination protein REC114-like. (231 aa)
	neil1-2	Endonuclease 8-like 1 isoform X1. (151 aa)
	LOC106612627	Bifunctional polynucleotide phosphatase/kinase-like. (619 aa)
	LOC106580473	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (312 aa)
	polb	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (344 aa)
	LOC106605164	DNA repair protein XRCC1-like. (989 aa)
	lig3	DNA ligase. (1023 aa)
	LOC106582635	DNA repair protein XRCC1-like. (633 aa)
	LOC106603393	Short transient receptor potential channel 2-like. (448 aa)
	ENSSSAP00000115415	annotation not available (257 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000115415	LOC106562128	ENSSSAP00000115415	ENSSSAP00000012979	annotation not available	Meiotic recombination protein REC114-like.	0.905
ENSSSAP00000115415	LOC106580473	ENSSSAP00000115415	ENSSSAP00000043267	annotation not available	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.901
ENSSSAP00000115415	LOC106582635	ENSSSAP00000115415	ENSSSAP00000083146	annotation not available	DNA repair protein XRCC1-like.	0.989
ENSSSAP00000115415	LOC106603393	ENSSSAP00000115415	ENSSSAP00000114068	annotation not available	Short transient receptor potential channel 2-like.	0.982
ENSSSAP00000115415	LOC106605164	ENSSSAP00000115415	ENSSSAP00000054789	annotation not available	DNA repair protein XRCC1-like.	0.989
ENSSSAP00000115415	LOC106612627	ENSSSAP00000115415	ENSSSAP00000033738	annotation not available	Bifunctional polynucleotide phosphatase/kinase-like.	0.927
ENSSSAP00000115415	neil1-2	ENSSSAP00000115415	ENSSSAP00000018312	annotation not available	Endonuclease 8-like 1 isoform X1.	0.692
ENSSSAP00000115415	polb	ENSSSAP00000115415	ENSSSAP00000043656	annotation not available	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.901
LOC106562128	ENSSSAP00000115415	ENSSSAP00000012979	ENSSSAP00000115415	Meiotic recombination protein REC114-like.	annotation not available	0.905
LOC106562128	LOC106580473	ENSSSAP00000012979	ENSSSAP00000043267	Meiotic recombination protein REC114-like.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.828
LOC106562128	LOC106582635	ENSSSAP00000012979	ENSSSAP00000083146	Meiotic recombination protein REC114-like.	DNA repair protein XRCC1-like.	0.915
LOC106562128	LOC106603393	ENSSSAP00000012979	ENSSSAP00000114068	Meiotic recombination protein REC114-like.	Short transient receptor potential channel 2-like.	0.908
LOC106562128	LOC106605164	ENSSSAP00000012979	ENSSSAP00000054789	Meiotic recombination protein REC114-like.	DNA repair protein XRCC1-like.	0.915
LOC106562128	lig3	ENSSSAP00000012979	ENSSSAP00000058163	Meiotic recombination protein REC114-like.	DNA ligase.	0.905
LOC106562128	neil1-2	ENSSSAP00000012979	ENSSSAP00000018312	Meiotic recombination protein REC114-like.	Endonuclease 8-like 1 isoform X1.	0.788
LOC106562128	polb	ENSSSAP00000012979	ENSSSAP00000043656	Meiotic recombination protein REC114-like.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.828
LOC106580473	ENSSSAP00000115415	ENSSSAP00000043267	ENSSSAP00000115415	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	annotation not available	0.901
LOC106580473	LOC106562128	ENSSSAP00000043267	ENSSSAP00000012979	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	Meiotic recombination protein REC114-like.	0.828
LOC106580473	LOC106582635	ENSSSAP00000043267	ENSSSAP00000083146	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	DNA repair protein XRCC1-like.	0.983
LOC106580473	LOC106603393	ENSSSAP00000043267	ENSSSAP00000114068	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	Short transient receptor potential channel 2-like.	0.880