7 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106609650	Semaphorin-3aa-like; Belongs to the semaphorin family. (403 aa)
	LOC106575059	FERM, RhoGEF and pleckstrin domain-containing protein 1-like. (808 aa)
	LOC106590027	Neuropilin; Belongs to the neuropilin family. (927 aa)
	LOC106572278	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family. (819 aa)
	LOC106566890	plexin-A1-like isoform X4. (1884 aa)
	LOC106578544	Neuropilin; Belongs to the neuropilin family. (928 aa)
	plxna2	plexin-A2. (1909 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106566890	LOC106572278	ENSSSAP00000104354	ENSSSAP00000076908	plexin-A1-like isoform X4.	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	0.568
LOC106566890	LOC106575059	ENSSSAP00000104354	ENSSSAP00000013998	plexin-A1-like isoform X4.	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	0.435
LOC106566890	LOC106578544	ENSSSAP00000104354	ENSSSAP00000116570	plexin-A1-like isoform X4.	Neuropilin; Belongs to the neuropilin family.	0.704
LOC106566890	LOC106590027	ENSSSAP00000104354	ENSSSAP00000028869	plexin-A1-like isoform X4.	Neuropilin; Belongs to the neuropilin family.	0.704
LOC106566890	LOC106609650	ENSSSAP00000104354	ENSSSAP00000012855	plexin-A1-like isoform X4.	Semaphorin-3aa-like; Belongs to the semaphorin family.	0.568
LOC106572278	LOC106566890	ENSSSAP00000076908	ENSSSAP00000104354	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	plexin-A1-like isoform X4.	0.568
LOC106572278	LOC106575059	ENSSSAP00000076908	ENSSSAP00000013998	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	0.590
LOC106572278	LOC106578544	ENSSSAP00000076908	ENSSSAP00000116570	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	Neuropilin; Belongs to the neuropilin family.	0.930
LOC106572278	LOC106590027	ENSSSAP00000076908	ENSSSAP00000028869	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	Neuropilin; Belongs to the neuropilin family.	0.930
LOC106572278	plxna2	ENSSSAP00000076908	ENSSSAP00000118068	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	plexin-A2.	0.568
LOC106575059	LOC106566890	ENSSSAP00000013998	ENSSSAP00000104354	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	plexin-A1-like isoform X4.	0.435
LOC106575059	LOC106572278	ENSSSAP00000013998	ENSSSAP00000076908	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	0.590
LOC106575059	LOC106578544	ENSSSAP00000013998	ENSSSAP00000116570	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	Neuropilin; Belongs to the neuropilin family.	0.708
LOC106575059	LOC106590027	ENSSSAP00000013998	ENSSSAP00000028869	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	Neuropilin; Belongs to the neuropilin family.	0.708
LOC106575059	LOC106609650	ENSSSAP00000013998	ENSSSAP00000012855	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	Semaphorin-3aa-like; Belongs to the semaphorin family.	0.590
LOC106575059	plxna2	ENSSSAP00000013998	ENSSSAP00000118068	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	plexin-A2.	0.435
LOC106578544	LOC106566890	ENSSSAP00000116570	ENSSSAP00000104354	Neuropilin; Belongs to the neuropilin family.	plexin-A1-like isoform X4.	0.704
LOC106578544	LOC106572278	ENSSSAP00000116570	ENSSSAP00000076908	Neuropilin; Belongs to the neuropilin family.	LOW QUALITY PROTEIN: semaphorin-3B-like; Belongs to the semaphorin family.	0.930
LOC106578544	LOC106575059	ENSSSAP00000116570	ENSSSAP00000013998	Neuropilin; Belongs to the neuropilin family.	FERM, RhoGEF and pleckstrin domain-containing protein 1-like.	0.708
LOC106578544	LOC106609650	ENSSSAP00000116570	ENSSSAP00000012855	Neuropilin; Belongs to the neuropilin family.	Semaphorin-3aa-like; Belongs to the semaphorin family.	0.930