(7 nodes) Mixed, incl. Beta-catenin, and Beta-catenin-interacting ICAT domain network (Salmo salar)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ctnnbip1	Beta-catenin-interacting protein 1. (81 aa)
	ctnnb1	Catenin beta-1. (790 aa)
	LOC106564751	Junction plakoglobin-like. (734 aa)
	apc2	Adenomatous polyposis coli protein 2. (2518 aa)
	LOC106595544	Axin-1-like. (532 aa)
	LOC106603317	APC membrane recruitment protein 1-like. (901 aa)
	LOC106569978	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily. (443 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106564751	LOC106569978	ENSSSAP00000039101	ENSSSAP00000101505	Junction plakoglobin-like.	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	0.835
LOC106564751	LOC106595544	ENSSSAP00000039101	ENSSSAP00000069899	Junction plakoglobin-like.	Axin-1-like.	0.810
LOC106564751	LOC106603317	ENSSSAP00000039101	ENSSSAP00000100730	Junction plakoglobin-like.	APC membrane recruitment protein 1-like.	0.835
LOC106564751	apc2	ENSSSAP00000039101	ENSSSAP00000046055	Junction plakoglobin-like.	Adenomatous polyposis coli protein 2.	0.885
LOC106564751	ctnnb1	ENSSSAP00000039101	ENSSSAP00000038398	Junction plakoglobin-like.	Catenin beta-1.	0.953
LOC106564751	ctnnbip1	ENSSSAP00000039101	ENSSSAP00000011880	Junction plakoglobin-like.	Beta-catenin-interacting protein 1.	0.979
LOC106569978	LOC106564751	ENSSSAP00000101505	ENSSSAP00000039101	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	Junction plakoglobin-like.	0.835
LOC106569978	LOC106595544	ENSSSAP00000101505	ENSSSAP00000069899	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	Axin-1-like.	0.786
LOC106569978	LOC106603317	ENSSSAP00000101505	ENSSSAP00000100730	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	APC membrane recruitment protein 1-like.	0.684
LOC106569978	apc2	ENSSSAP00000101505	ENSSSAP00000046055	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	Adenomatous polyposis coli protein 2.	0.814
LOC106569978	ctnnb1	ENSSSAP00000101505	ENSSSAP00000038398	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	Catenin beta-1.	0.958
LOC106595544	LOC106564751	ENSSSAP00000069899	ENSSSAP00000039101	Axin-1-like.	Junction plakoglobin-like.	0.810
LOC106595544	LOC106569978	ENSSSAP00000069899	ENSSSAP00000101505	Axin-1-like.	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	0.786
LOC106595544	LOC106603317	ENSSSAP00000069899	ENSSSAP00000100730	Axin-1-like.	APC membrane recruitment protein 1-like.	0.799
LOC106595544	apc2	ENSSSAP00000069899	ENSSSAP00000046055	Axin-1-like.	Adenomatous polyposis coli protein 2.	0.941
LOC106595544	ctnnb1	ENSSSAP00000069899	ENSSSAP00000038398	Axin-1-like.	Catenin beta-1.	0.992
LOC106603317	LOC106564751	ENSSSAP00000100730	ENSSSAP00000039101	APC membrane recruitment protein 1-like.	Junction plakoglobin-like.	0.835
LOC106603317	LOC106569978	ENSSSAP00000100730	ENSSSAP00000101505	APC membrane recruitment protein 1-like.	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	0.684
LOC106603317	LOC106595544	ENSSSAP00000100730	ENSSSAP00000069899	APC membrane recruitment protein 1-like.	Axin-1-like.	0.799
LOC106603317	apc2	ENSSSAP00000100730	ENSSSAP00000046055	APC membrane recruitment protein 1-like.	Adenomatous polyposis coli protein 2.	0.904