18 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106564027	Netrin receptor UNC5C-like. (966 aa)
	LOC106605779	L-rhamnose-binding lectin CSL2-like. (288 aa)
	LOC106580525	Netrin receptor UNC5D-like isoform X1. (973 aa)
	LOC106596447	Latrophilin-3-like. (187 aa)
	ENSSSAP00000033562	annotation not available (187 aa)
	ENSSSAP00000034073	annotation not available (187 aa)
	LOC106571616	Leucine-rich repeat transmembrane protein FLRT2-like. (670 aa)
	flrt2	Leucine-rich repeat transmembrane protein FLRT2. (681 aa)
	LOC106567541	Netrin receptor UNC5D-like isoform X1. (963 aa)
	LOC106563138	Netrin receptor UNC5D-like isoform X2. (979 aa)
	LOC106568183	Netrin receptor UNC5C-like isoform X1. (961 aa)
	ENSSSAP00000090606	annotation not available (142 aa)
	LOC106611272	Leucine-rich repeat transmembrane protein FLRT2-like isoform X1. (682 aa)
	LOC106585133	Netrin receptor UNC5D-like isoform X1. (987 aa)
	LOC106585820	Netrin receptor UNC5C-like isoform X1. (973 aa)
	LOC106608111	Leucine-rich repeat transmembrane protein FLRT2-like. (670 aa)
	adgrl3	Latrophilin-3 isoform X5; Belongs to the G-protein coupled receptor 2 family. (1567 aa)
	LOC106569141	Adhesion G protein-coupled receptor L2-like isoform X1; Belongs to the G-protein coupled receptor 2 family. (1545 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000033562	LOC106563138	ENSSSAP00000033562	ENSSSAP00000061066	annotation not available	Netrin receptor UNC5D-like isoform X2.	0.983
ENSSSAP00000033562	LOC106564027	ENSSSAP00000033562	ENSSSAP00000003929	annotation not available	Netrin receptor UNC5C-like.	0.981
ENSSSAP00000033562	LOC106567541	ENSSSAP00000033562	ENSSSAP00000058492	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000033562	LOC106568183	ENSSSAP00000033562	ENSSSAP00000062531	annotation not available	Netrin receptor UNC5C-like isoform X1.	0.981
ENSSSAP00000033562	LOC106571616	ENSSSAP00000033562	ENSSSAP00000035503	annotation not available	Leucine-rich repeat transmembrane protein FLRT2-like.	0.689
ENSSSAP00000033562	LOC106580525	ENSSSAP00000033562	ENSSSAP00000017396	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000033562	LOC106585133	ENSSSAP00000033562	ENSSSAP00000096082	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000033562	LOC106585820	ENSSSAP00000033562	ENSSSAP00000104332	annotation not available	Netrin receptor UNC5C-like isoform X1.	0.981
ENSSSAP00000033562	LOC106608111	ENSSSAP00000033562	ENSSSAP00000106030	annotation not available	Leucine-rich repeat transmembrane protein FLRT2-like.	0.689
ENSSSAP00000033562	LOC106611272	ENSSSAP00000033562	ENSSSAP00000093277	annotation not available	Leucine-rich repeat transmembrane protein FLRT2-like isoform X1.	0.689
ENSSSAP00000033562	flrt2	ENSSSAP00000033562	ENSSSAP00000044424	annotation not available	Leucine-rich repeat transmembrane protein FLRT2.	0.689
ENSSSAP00000034073	LOC106563138	ENSSSAP00000034073	ENSSSAP00000061066	annotation not available	Netrin receptor UNC5D-like isoform X2.	0.983
ENSSSAP00000034073	LOC106564027	ENSSSAP00000034073	ENSSSAP00000003929	annotation not available	Netrin receptor UNC5C-like.	0.981
ENSSSAP00000034073	LOC106567541	ENSSSAP00000034073	ENSSSAP00000058492	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000034073	LOC106568183	ENSSSAP00000034073	ENSSSAP00000062531	annotation not available	Netrin receptor UNC5C-like isoform X1.	0.981
ENSSSAP00000034073	LOC106571616	ENSSSAP00000034073	ENSSSAP00000035503	annotation not available	Leucine-rich repeat transmembrane protein FLRT2-like.	0.689
ENSSSAP00000034073	LOC106580525	ENSSSAP00000034073	ENSSSAP00000017396	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000034073	LOC106585133	ENSSSAP00000034073	ENSSSAP00000096082	annotation not available	Netrin receptor UNC5D-like isoform X1.	0.983
ENSSSAP00000034073	LOC106585820	ENSSSAP00000034073	ENSSSAP00000104332	annotation not available	Netrin receptor UNC5C-like isoform X1.	0.981
ENSSSAP00000034073	LOC106608111	ENSSSAP00000034073	ENSSSAP00000106030	annotation not available	Leucine-rich repeat transmembrane protein FLRT2-like.	0.689