(31 nodes) Vesicle fusion to plasma membrane, and Sec1 family network (Salmo salar)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	stx1b	Salmo salar syntaxin 1B (stx1b), mRNA. (291 aa)
	LOC106611384	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	LOC106609899	Syntaxin-3-like. (286 aa)
	SNP23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (215 aa)
	ENSSSAP00000011354	Syntaxin binding protein 2. (424 aa)
	ENSSSAP00000018596	annotation not available (164 aa)
	LOC106600813	Syntaxin-1B; Belongs to the syntaxin family. (298 aa)
	ENSSSAP00000022163	Syntaxin binding protein 1a. (562 aa)
	ENSSSAP00000027072	annotation not available (237 aa)
	LOC106579303	Syntaxin-4-like; Belongs to the syntaxin family. (296 aa)
	LOC106600924	Syntaxin-binding protein 2-like; Belongs to the STXBP/unc-18/SEC1 family. (589 aa)
	LOC106585214	Syntaxin-binding protein 1-like isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (661 aa)
	ENSSSAP00000044139	Zgc:92912. (134 aa)
	LOC100194580	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
	LOC106569337	Synaptosomal-associated protein 47-like isoform X1. (429 aa)
	stxbp3	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
	ENSSSAP00000054489	Syntaxin binding protein 1b. (598 aa)
	STX3	Syntaxin-3-like isoform X1; Belongs to the syntaxin family. (328 aa)
	LOC106612282	Complexin-2. (140 aa)
	LOC106576317	Synaptotagmin-1-like isoform X1. (417 aa)
	ENSSSAP00000070508	Vesicle-associated membrane protein 2. (138 aa)
	LOC106567284	Synaptotagmin-2-like isoform X1. (430 aa)
	LOC106589274	Syntaxin-4-like; Belongs to the syntaxin family. (296 aa)
	LOC106579173	Synaptotagmin-2-like. (419 aa)
	ENSSSAP00000084506	Vesicle-associated membrane protein 2-like. (115 aa)
	LOC106580895	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (278 aa)
	LOC106574196	Vesicle-associated membrane protein 1-like. (126 aa)
	LOC106602583	Syntaxin-3-like isoform X1; Belongs to the syntaxin family. (335 aa)
	LOC106603197	Vesicle-associated membrane protein 2. (110 aa)
	LOC106563160	Syntaxin-2-like isoform X1; Belongs to the syntaxin family. (329 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000011354	ENSSSAP00000027072	ENSSSAP00000011354	ENSSSAP00000027072	Syntaxin binding protein 2.	annotation not available	0.695
ENSSSAP00000011354	ENSSSAP00000044139	ENSSSAP00000011354	ENSSSAP00000044139	Syntaxin binding protein 2.	Zgc:92912.	0.779
ENSSSAP00000011354	ENSSSAP00000070508	ENSSSAP00000011354	ENSSSAP00000070508	Syntaxin binding protein 2.	Vesicle-associated membrane protein 2.	0.779
ENSSSAP00000011354	ENSSSAP00000084506	ENSSSAP00000011354	ENSSSAP00000084506	Syntaxin binding protein 2.	Vesicle-associated membrane protein 2-like.	0.779
ENSSSAP00000011354	LOC100194580	ENSSSAP00000011354	ENSSSAP00000046759	Syntaxin binding protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.774
ENSSSAP00000011354	LOC106563160	ENSSSAP00000011354	ENSSSAP00000120059	Syntaxin binding protein 2.	Syntaxin-2-like isoform X1; Belongs to the syntaxin family.	0.731
ENSSSAP00000011354	LOC106567284	ENSSSAP00000011354	ENSSSAP00000076349	Syntaxin binding protein 2.	Synaptotagmin-2-like isoform X1.	0.579
ENSSSAP00000011354	LOC106569337	ENSSSAP00000011354	ENSSSAP00000049890	Syntaxin binding protein 2.	Synaptosomal-associated protein 47-like isoform X1.	0.695
ENSSSAP00000011354	LOC106574196	ENSSSAP00000011354	ENSSSAP00000100300	Syntaxin binding protein 2.	Vesicle-associated membrane protein 1-like.	0.779
ENSSSAP00000011354	LOC106576317	ENSSSAP00000011354	ENSSSAP00000066141	Syntaxin binding protein 2.	Synaptotagmin-1-like isoform X1.	0.579
ENSSSAP00000011354	LOC106579173	ENSSSAP00000011354	ENSSSAP00000079198	Syntaxin binding protein 2.	Synaptotagmin-2-like.	0.579
ENSSSAP00000011354	LOC106579303	ENSSSAP00000011354	ENSSSAP00000033928	Syntaxin binding protein 2.	Syntaxin-4-like; Belongs to the syntaxin family.	0.814
ENSSSAP00000011354	LOC106580895	ENSSSAP00000011354	ENSSSAP00000087724	Syntaxin binding protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.774
ENSSSAP00000011354	LOC106589274	ENSSSAP00000011354	ENSSSAP00000078599	Syntaxin binding protein 2.	Syntaxin-4-like; Belongs to the syntaxin family.	0.814
ENSSSAP00000011354	LOC106600813	ENSSSAP00000011354	ENSSSAP00000019122	Syntaxin binding protein 2.	Syntaxin-1B; Belongs to the syntaxin family.	0.819
ENSSSAP00000011354	LOC106602583	ENSSSAP00000011354	ENSSSAP00000102135	Syntaxin binding protein 2.	Syntaxin-3-like isoform X1; Belongs to the syntaxin family.	0.819
ENSSSAP00000011354	LOC106603197	ENSSSAP00000011354	ENSSSAP00000109982	Syntaxin binding protein 2.	Vesicle-associated membrane protein 2.	0.779
ENSSSAP00000011354	LOC106609899	ENSSSAP00000011354	ENSSSAP00000007539	Syntaxin binding protein 2.	Syntaxin-3-like.	0.819
ENSSSAP00000011354	LOC106611384	ENSSSAP00000011354	ENSSSAP00000006575	Syntaxin binding protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.863
ENSSSAP00000011354	LOC106612282	ENSSSAP00000011354	ENSSSAP00000065724	Syntaxin binding protein 2.	Complexin-2.	0.697