61 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pgam1	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (254 aa)
	aldoa	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (384 aa)
	eno4	Enolase-like protein ENO4 isoform X1. (652 aa)
	LOC106609462	Fructose-2,6-bisphosphatase TIGAR B-like. (271 aa)
	ENSSSAP00000006853	Beta-enolase-like. (102 aa)
	aldob	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (394 aa)
	tkfc	Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (Cyclizing). (688 aa)
	mycbpap	MYCBP-associated protein. (610 aa)
	LOC106564733	Hexokinase-1-like. (973 aa)
	LOC106564313	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (262 aa)
	LOC106568020	Phosphoglycerate kinase. (766 aa)
	LOC106600163	Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
	LOC106584710	Poly [ADP-ribose] polymerase. (577 aa)
	enoa	Alpha-enolase isoform X1. (433 aa)
	tpi1b	Salmo salar triosephosphate isomerase 1b (tpi1b), mRNA. (265 aa)
	tkt	Transketolase-like protein 2. (658 aa)
	LOC106575942	Glyceraldehyde-3-phosphate dehydrogenase. (353 aa)
	G3P	Glyceraldehyde-3-phosphate dehydrogenase. (350 aa)
	LOC100196671	Beta-enolase; Belongs to the enolase family. (455 aa)
	cl005	Salmo salar CL005 protein (cl005), mRNA. (293 aa)
	aldoc	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (361 aa)
	LOC106612788	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (417 aa)
	LOC106604855	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (451 aa)
	LOC106565155	Transketolase-like. (633 aa)
	LOC100194624	Fructose-bisphosphate aldolase A; Plays a key role in glycolysis and gluconeogenesis. Belongs to the class I fructose-bisphosphate aldolase family. (363 aa)
	ENSSSAP00000048971	annotation not available (161 aa)
	LOC106582566	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (707 aa)
	LOC106577739	Glyceraldehyde-3-phosphate dehydrogenase. (368 aa)
	LOC106561989	Fructose-1,6-bisphosphatase 1-like; Belongs to the FBPase class 1 family. (386 aa)
	LOC106566383	Alpha-enolase isoform X2. (493 aa)
	ENSSSAP00000065567	Fructose-1,6-bisphosphatase 1-like. (263 aa)
	LOC106572792	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (855 aa)
	LOC106576545	Gamma-enolase-like. (446 aa)
	LOC106595066	Gamma-enolase-like. (608 aa)
	PGAM1	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase. (129 aa)
	pgk	Phosphoglycerate kinase. (417 aa)
	LOC106598378	Cleavage stimulation factor subunit 3-like. (304 aa)
	fbp2	Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family. (195 aa)
	LOC100194623	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (363 aa)
	ENSSSAP00000080533	annotation not available (95 aa)
	LOC106588431	Glyceraldehyde-3-phosphate dehydrogenase. (363 aa)
	LOC106588432	Glyceraldehyde-3-phosphate dehydrogenase. (365 aa)
	k6pp	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (783 aa)
	LOC106588424	Gamma-enolase-like isoform X1. (511 aa)
	ENSSSAP00000089375	Triosephosphate isomerase 1a. (283 aa)
	LOC100194645	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (255 aa)
	LOC106587214	Pyruvate kinase; Belongs to the pyruvate kinase family. (582 aa)
	LOC106569991	Glyceraldehyde-3-phosphate dehydrogenase-like. (361 aa)
	ENSSSAP00000098433	annotation not available (138 aa)
	enog	Salmo salar Gamma-enolase (enog), mRNA. (460 aa)
	LOC106569985	Triosephosphate isomerase. (248 aa)
	LOC106566997	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (792 aa)
	LOC106589759	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (254 aa)
	LOC106583351	Triosephosphate isomerase. (248 aa)
	taldo	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (338 aa)
	LOC106565515	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (863 aa)
	LOC106578535	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (876 aa)
	LOC106561646	Bisphosphoglycerate mutase-like isoform X1. (274 aa)
	LOC106565361	Enolase-like. (464 aa)
	LOC100194644	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (255 aa)
	f264	6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 4 isoform X1. (591 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000006853	ENSSSAP00000048971	ENSSSAP00000006853	ENSSSAP00000048971	Beta-enolase-like.	annotation not available	0.699
ENSSSAP00000006853	ENSSSAP00000089375	ENSSSAP00000006853	ENSSSAP00000089375	Beta-enolase-like.	Triosephosphate isomerase 1a.	0.844
ENSSSAP00000006853	ENSSSAP00000098433	ENSSSAP00000006853	ENSSSAP00000098433	Beta-enolase-like.	annotation not available	0.683
ENSSSAP00000006853	G3P	ENSSSAP00000006853	ENSSSAP00000041182	Beta-enolase-like.	Glyceraldehyde-3-phosphate dehydrogenase.	0.699
ENSSSAP00000006853	LOC100194623	ENSSSAP00000006853	ENSSSAP00000076185	Beta-enolase-like.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.441
ENSSSAP00000006853	LOC100194624	ENSSSAP00000006853	ENSSSAP00000045746	Beta-enolase-like.	Fructose-bisphosphate aldolase A; Plays a key role in glycolysis and gluconeogenesis. Belongs to the class I fructose-bisphosphate aldolase family.	0.441
ENSSSAP00000006853	LOC100194644	ENSSSAP00000006853	ENSSSAP00000120322	Beta-enolase-like.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.710
ENSSSAP00000006853	LOC100194645	ENSSSAP00000006853	ENSSSAP00000092406	Beta-enolase-like.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.710
ENSSSAP00000006853	LOC106561646	ENSSSAP00000006853	ENSSSAP00000114448	Beta-enolase-like.	Bisphosphoglycerate mutase-like isoform X1.	0.710
ENSSSAP00000006853	LOC106564313	ENSSSAP00000006853	ENSSSAP00000017197	Beta-enolase-like.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.710
ENSSSAP00000006853	LOC106565155	ENSSSAP00000006853	ENSSSAP00000045232	Beta-enolase-like.	Transketolase-like.	0.531
ENSSSAP00000006853	LOC106565515	ENSSSAP00000006853	ENSSSAP00000105177	Beta-enolase-like.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.635
ENSSSAP00000006853	LOC106566997	ENSSSAP00000006853	ENSSSAP00000100384	Beta-enolase-like.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.635
ENSSSAP00000006853	LOC106568020	ENSSSAP00000006853	ENSSSAP00000022946	Beta-enolase-like.	Phosphoglycerate kinase.	0.915
ENSSSAP00000006853	LOC106569985	ENSSSAP00000006853	ENSSSAP00000099468	Beta-enolase-like.	Triosephosphate isomerase.	0.844
ENSSSAP00000006853	LOC106569991	ENSSSAP00000006853	ENSSSAP00000098421	Beta-enolase-like.	Glyceraldehyde-3-phosphate dehydrogenase-like.	0.699
ENSSSAP00000006853	LOC106572792	ENSSSAP00000006853	ENSSSAP00000067269	Beta-enolase-like.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.635
ENSSSAP00000006853	LOC106575942	ENSSSAP00000006853	ENSSSAP00000040448	Beta-enolase-like.	Glyceraldehyde-3-phosphate dehydrogenase.	0.699
ENSSSAP00000006853	LOC106577739	ENSSSAP00000006853	ENSSSAP00000060257	Beta-enolase-like.	Glyceraldehyde-3-phosphate dehydrogenase.	0.699
ENSSSAP00000006853	LOC106578535	ENSSSAP00000006853	ENSSSAP00000112139	Beta-enolase-like.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.635