STRINGSTRING
AFDN AFDN LOC106602884 LOC106602884 LOC106603236 LOC106603236 LOC106560694 LOC106560694 LOC106587244-2 LOC106587244-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFDNAfadin-like isoform X5. (1963 aa)
LOC106602884Junctional adhesion molecule A-like. (296 aa)
LOC106603236Afadin-like. (1285 aa)
LOC106560694Junctional adhesion molecule A-like. (357 aa)
LOC106587244-2Tight junction protein ZO-1-like isoform X11; Belongs to the MAGUK family. (2001 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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