144 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106585547	Transcription cofactor vestigial-like protein 4. (288 aa)
	LOC106565373	Citron Rho-interacting kinase-like isoform X2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2227 aa)
	LOC106583303	Nuclear receptor subfamily 1 group D member 1-like isoform X1. (567 aa)
	LOC106582882	GATA-binding factor 2-like isoform X2. (425 aa)
	LOC106582928	GATA-binding factor 2-like isoform X2. (456 aa)
	LOC106601511	Mediator of RNA polymerase II transcription subunit 25-like isoform X1. (753 aa)
	LOC106563948	Mothers against decapentaplegic homolog. (554 aa)
	LOC106592310	Uncharacterized protein LOC106563045. (742 aa)
	SIX3	Homeobox protein SIX3-like. (294 aa)
	baiap2	Brain-specific angiogenesis inhibitor 1-associated protein 2 isoform X1. (594 aa)
	LOC106599551	Period circadian protein homolog 2-like isoform X1. (1486 aa)
	LOC106608924	Histone acetyltransferase p300-like isoform X2. (2752 aa)
	LOC106601470	Brain-specific angiogenesis inhibitor 1-associated protein 2-like. (437 aa)
	LOC106611936	C-terminal-binding protein 1-like isoform X2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (512 aa)
	xpp3	Histone acetyltransferase p300-like isoform X8. (2344 aa)
	LOC106601541	Mediator of RNA polymerase II transcription subunit 25-like isoform X1. (753 aa)
	LOC106608520	Period circadian protein homolog 1-like isoform X1. (1403 aa)
	elob	Transcription Elongation factor B polypeptide 2. (119 aa)
	LOC106606286	Brain-specific angiogenesis inhibitor 1-associated protein 2-like isoform X2. (517 aa)
	LOC106607496	Nuclear receptor subfamily 1 group D member 1-like. (607 aa)
	LOC106608478	Transcriptional-regulating factor 1-like. (1092 aa)
	LOC106607005	Protein Wiz-like. (748 aa)
	HDGF	Hepatoma-derived growth factor-like. (230 aa)
	sp1	Transcription factor Sp1 isoform X2. (674 aa)
	LOC106560998	CCR4-NOT transcription complex subunit 2-like isoform X3. (551 aa)
	Elob	Elongin B. (128 aa)
	LOC106573302	Bile acid receptor-like isoform X1. (487 aa)
	LOC106564464	CREB-binding protein-like isoform X6. (2486 aa)
	LOC106575772	Polycomb protein eed. (106 aa)
	LOC106564568	Protein Wiz-like. (836 aa)
	LOC106575067	Nuclear factor erythroid 2-related factor 2-like isoform X1. (611 aa)
	LOC106600825	Nuclear receptor subfamily 1 group D member 1-like. (605 aa)
	LOC106574163	Nuclear receptor subfamily 5 group A member 2-like. (556 aa)
	gata1	GATA-binding factor 1. (424 aa)
	six3	Homeobox protein SIX3. (294 aa)
	LOC106589595	Protein Wiz-like. (895 aa)
	ENSSSAP00000019179	annotation not available (833 aa)
	LOC106568081	PHD finger protein 12-like. (993 aa)
	LOC106597592	CCR4-NOT transcription complex subunit 2-like. (339 aa)
	ENSSSAP00000020650	Zinc finger protein 644b. (1208 aa)
	LOC106589530	CREB-binding protein-like isoform X4. (2921 aa)
	ENSSSAP00000022531	annotation not available (79 aa)
	LOC100136532	Peroxisomal proliferator-activated receptor beta1A isoform X1. (536 aa)
	nr1h4	Bile acid receptor. (580 aa)
	LOC106571907	Transcription cofactor vestigial-like protein 4 isoform X2. (263 aa)
	LOC106560308	Zinc finger protein 644-like. (1451 aa)
	LOC106562812	C-terminal-binding protein 2-like. (252 aa)
	LOC106572339	High mobility group protein HMG-I/HMG-Y-like. (95 aa)
	LOC106606530	Polycomb protein eed-like isoform X1. (394 aa)
	LOC106565929	Zinc finger protein 618-like isoform X2. (941 aa)
	elob-2	Transcription elongation factor B polypeptide 2. (119 aa)
	LOC106565550	GATA-binding factor 2-like isoform X1. (464 aa)
	LOC106566756	Transcription cofactor vestigial-like protein 4 isoform X2. (263 aa)
	vgll4	Transcription cofactor vestigial-like protein 4. (302 aa)
	LOC106576146	Transcription factor GATA-3-like isoform X2. (267 aa)
	ENSSSAP00000041104	annotation not available (186 aa)
	LOC106577038	YLP motif-containing protein 1 isoform X1. (1090 aa)
	LOC106567479	Histone-lysine N-methyltransferase EHMT1-like isoform X5. (1304 aa)
	LOC106608888	Homeobox protein SIX6-like isoform X1. (266 aa)
	LOC106580167	Mothers against decapentaplegic homolog. (579 aa)
	LOC106590442	CREB-binding protein-like isoform X1. (2411 aa)
	LOC106607007	Protein Wiz-like. (1026 aa)
	LOC106597994	Protein Wiz-like. (1026 aa)
	LOC106601342	Protein Wiz-like isoform X1. (1025 aa)
	LOC106566843	Bile acid receptor-like isoform X1. (492 aa)
	eed	Polycomb protein EED. (348 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1794 aa)
	LOC106603275	PHD finger protein 12-like. (995 aa)
	LOC106606488	LOW QUALITY PROTEIN: CREB-binding protein-like. (2296 aa)
	lef1	Lymphoid enhancer-binding factor 1 isoform X5. (408 aa)
	JUND	Transcription factor jun-D-like isoform X1. (273 aa)
	ENSSSAP00000050742	annotation not available (60 aa)
	zbtb49	Zinc finger and BTB domain-containing protein 49 isoform X5. (807 aa)
	LOC106563271	Zinc finger protein 618-like. (892 aa)
	LOC106577861	Homeobox protein SIX6-like isoform X1. (266 aa)
	stk36	Serine/threonine-protein kinase 36 isoform X1. (145 aa)
	LOC106578136	Uncharacterized protein LOC106578136. (894 aa)
	LOC106581238	PHD finger protein 12-like isoform X1. (1051 aa)
	LOC106588319	Mothers against decapentaplegic homolog. (587 aa)
	s10ae	Uncharacterized protein LOC106588313. (729 aa)
	LOC106563135	Histone-lysine N-methyltransferase EHMT1-like isoform X2. (1307 aa)
	LOC106561422	Bile acid receptor-like isoform X1. (492 aa)
	LOC106612183	Uncharacterized protein LOC106612183 isoform X1. (449 aa)
	LOC106604922	C-terminal-binding protein 2 isoform X3; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (614 aa)
	ENSSSAP00000066332	annotation not available (79 aa)
	LOC106604969	C-terminal-binding protein 1-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (360 aa)
	ENSSSAP00000068094	annotation not available (104 aa)
	pparb2b	Peroxisome proliferator-activated receptor beta2B isoform X1. (519 aa)
	LOC106588564	Hepatoma-derived growth factor-like isoform X1. (224 aa)
	ENSSSAP00000069793	annotation not available (79 aa)
	LOC106600931	Nuclear receptor subfamily 5 group A member 2-like. (534 aa)
	LOC106563389	Period circadian protein homolog 1-like isoform X1. (1485 aa)
	LOC106568180	Mothers against decapentaplegic homolog. (548 aa)
	ctbp1	C-terminal-binding protein 1 isoform X2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (496 aa)
	LOC106586247	Nuclear factor erythroid 2-related factor 2-like. (614 aa)
	HAND1	Heart- and neural crest derivatives-expressed protein 1-like. (189 aa)
	LOC106567288	High mobility group protein HMG-I/HMG-Y-like isoform X1. (63 aa)
	ENSSSAP00000076749	Cyclic AMP-responsive element-binding protein 3-like protein 3. (458 aa)
	LOC106572653	Nuclear receptor subfamily 1 group D member 1-like. (584 aa)
	cnot2	CCR4-NOT transcription complex subunit 2 isoform X1. (552 aa)
	LOC106589900	Brain-specific angiogenesis inhibitor 1-associated protein 2-like isoform X4. (590 aa)
	vgll4-2	Transcription cofactor vestigial-like protein 4. (271 aa)
	LOC106607167	Histone acetyltransferase p300-like isoform X9. (2695 aa)
	LOC106565463	Nuclear receptor subfamily 1 group D member 1-like isoform X2. (565 aa)
	GATA2	GATA-binding factor 2-like isoform X1. (464 aa)
	LOC106567785	Androgen receptor beta 1. (855 aa)
	LOC106604267	Androgen receptor-like. (696 aa)
	LOC106578932	Homeobox protein SIX3-like isoform X1. (265 aa)
	LOC106607804	Protein FAM89A-like. (170 aa)
	LOC106571399	Protein FAM89A-like. (170 aa)
	LOC106568986	Zinc finger protein 644-like isoform X3. (357 aa)
	LOC106585475	Citron Rho-interacting kinase-like isoform X3. (1678 aa)
	ENSSSAP00000086496	Zinc finger protein 644-like. (874 aa)
	ctbp2	C-terminal-binding protein 2 isoform X1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (523 aa)
	LOC106613100	PHD finger protein 12-like. (1041 aa)
	ENSSSAP00000087878	annotation not available (188 aa)
	ar	Androgen receptor isoform X1. (853 aa)
	NR5A1	Steroidogenic factor 1-like. (482 aa)
	LOC106569881	Mothers against decapentaplegic homolog. (589 aa)
	NR5A1-2	Nuclear receptor subfamily 5 group A member 2-like isoform X1. (511 aa)
	LOC106573907	Transcription factor jun-D-like. (271 aa)
	nf2l2	Nuclear factor erythroid 2-related factor 2. (637 aa)
	LOC106568945	Transcription factor jun-D-like. (301 aa)
	ENSSSAP00000099024	Euchromatic histone-lysine N-methyltransferase 1a. (624 aa)
	pparb2a	Peroxisome proliferator-activated receptor delta-like isoform X1. (521 aa)
	LOC106598905	Zinc finger protein 644-like. (1137 aa)
	smad4	Mothers against decapentaplegic homolog. (510 aa)
	LOC106580597	Cyclic AMP-responsive element-binding protein 3-like. (503 aa)
	LOC106605446	Mothers against decapentaplegic homolog. (565 aa)
	NR5A1-3	Nuclear receptor subfamily 5 group A member 2-like isoform X1. (487 aa)
	LOC100380769	Histone-lysine N-methyltransferase EHMT2 isoform X2. (1265 aa)
	SMAD4	Mothers against decapentaplegic homolog. (552 aa)
	LOC106588513	Histone-lysine N-methyltransferase EHMT2-like isoform X1. (1186 aa)
	per2	Period circadian protein homolog 2. (1345 aa)
	LOC106567064	Nuclear receptor subfamily 1 group D member 1-like. (581 aa)
	LOC106599020	Transcription factor jun-D-like. (301 aa)
	LOC106583133	LOW QUALITY PROTEIN: period circadian protein homolog 3-like. (1250 aa)
	LOC106603198	Period circadian protein homolog 1-like. (1519 aa)
	LOC106565821	GATA-binding factor 2-like isoform X1. (460 aa)
	LOC106613481	Nuclear receptor subfamily 5 group A member 2 isoform X1. (551 aa)
	LOC106579949	Citron Rho-interacting kinase-like isoform X8. (1677 aa)
	LOC106603903	C-terminal-binding protein 2-like isoform X2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (501 aa)
	ctbp2-2	C-terminal-binding protein 2 isoform X1. (1089 aa)
	LOC100136526	Peroxisome proliferator-activated receptor delta isoform X1. (621 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000019179	lef1	ENSSSAP00000019179	ENSSSAP00000048989	annotation not available	Lymphoid enhancer-binding factor 1 isoform X5.	0.555
ENSSSAP00000019179	med1	ENSSSAP00000019179	ENSSSAP00000044565	annotation not available	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.476
ENSSSAP00000020650	ENSSSAP00000099024	ENSSSAP00000020650	ENSSSAP00000099024	Zinc finger protein 644b.	Euchromatic histone-lysine N-methyltransferase 1a.	0.444
ENSSSAP00000020650	LOC100380769	ENSSSAP00000020650	ENSSSAP00000103249	Zinc finger protein 644b.	Histone-lysine N-methyltransferase EHMT2 isoform X2.	0.444
ENSSSAP00000020650	LOC106563135	ENSSSAP00000020650	ENSSSAP00000062605	Zinc finger protein 644b.	Histone-lysine N-methyltransferase EHMT1-like isoform X2.	0.444
ENSSSAP00000020650	LOC106567479	ENSSSAP00000020650	ENSSSAP00000042505	Zinc finger protein 644b.	Histone-lysine N-methyltransferase EHMT1-like isoform X5.	0.444
ENSSSAP00000020650	LOC106588513	ENSSSAP00000020650	ENSSSAP00000104916	Zinc finger protein 644b.	Histone-lysine N-methyltransferase EHMT2-like isoform X1.	0.444
ENSSSAP00000041104	LOC106564464	ENSSSAP00000041104	ENSSSAP00000014055	annotation not available	CREB-binding protein-like isoform X6.	0.666
ENSSSAP00000041104	LOC106589530	ENSSSAP00000041104	ENSSSAP00000020738	annotation not available	CREB-binding protein-like isoform X4.	0.631
ENSSSAP00000041104	LOC106590442	ENSSSAP00000041104	ENSSSAP00000043542	annotation not available	CREB-binding protein-like isoform X1.	0.666
ENSSSAP00000041104	LOC106606488	ENSSSAP00000041104	ENSSSAP00000047340	annotation not available	LOW QUALITY PROTEIN: CREB-binding protein-like.	0.666
ENSSSAP00000041104	LOC106607167	ENSSSAP00000041104	ENSSSAP00000081005	annotation not available	Histone acetyltransferase p300-like isoform X9.	0.631
ENSSSAP00000041104	LOC106608924	ENSSSAP00000041104	ENSSSAP00000003652	annotation not available	Histone acetyltransferase p300-like isoform X2.	0.631
ENSSSAP00000041104	med1	ENSSSAP00000041104	ENSSSAP00000044565	annotation not available	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.643
ENSSSAP00000041104	sp1	ENSSSAP00000041104	ENSSSAP00000011689	annotation not available	Transcription factor Sp1 isoform X2.	0.548
ENSSSAP00000041104	xpp3	ENSSSAP00000041104	ENSSSAP00000005298	annotation not available	Histone acetyltransferase p300-like isoform X8.	0.631
ENSSSAP00000068094	lef1	ENSSSAP00000068094	ENSSSAP00000048989	annotation not available	Lymphoid enhancer-binding factor 1 isoform X5.	0.555
ENSSSAP00000068094	med1	ENSSSAP00000068094	ENSSSAP00000044565	annotation not available	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.476
ENSSSAP00000086496	ENSSSAP00000099024	ENSSSAP00000086496	ENSSSAP00000099024	Zinc finger protein 644-like.	Euchromatic histone-lysine N-methyltransferase 1a.	0.444
ENSSSAP00000086496	LOC100380769	ENSSSAP00000086496	ENSSSAP00000103249	Zinc finger protein 644-like.	Histone-lysine N-methyltransferase EHMT2 isoform X2.	0.444